Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114797187
Identifier: 114797187
GI number: 114797187
Start: 2389208
End: 2389942
Strand: Direct
Name: 114797187
Synonym: HNE_2288
Alternate gene names: NA
Gene position: 2389208-2389942 (Clockwise)
Preceding gene: 114798769
Following gene: 114799871
Centisome position: 64.49
GC content: 66.8
Gene sequence:
>735_bases ATGGCCCGCCCCTTTGCCCTGAAGGACTTTGCCTACGCCCATCGCGGGCTGTGGACGAAAGACGGTCTGCCGGAGAATTC CCTCGGCAGCTTCAGCGCAGCGGCGGACGCCGGCCTCGGCATCGAGCTGGACCTGCGCCCCTCGGCCGATGGCGAGGTGA TGGTGTTCCATGACCCGTTATTGCAGCGCATGACCGGCGCTGAGGGACAGTTCGAGAACTTTCCGGCCAGCACGCTCAAA ACCCACCGCCTGAATGGCGGGGACGAGCCGGTGCCCTCGTTTGACGATCTCCTCTCCTTCTGGCCTCAGGATCTGCCGGT GCTGGCGGAGATGAAGATCGATGGCAGCACTGATCCGATGGCCTTCGCGCAGACAGTCGGCGCGCGGCTGATGGACTGGC CGGGCCTCGCCGCCGCAATGAGTTTTTCCGACATTGCCGTGCGCGCGCTGCCCGACGGGCTGATGCGGGGGCAGCTGATC GGACCGAGCAACCAGTTCGGGGACGCCTATTTTGACAGCTTTGCCCGGCGCGCCATGGCCGATGGCATCGATTACCTCGC CGTCCACTATACCGACGCGGCGCGCGCTGCGGCCGCCACGGCGGACCGCGGCATGCCTGTCGTCGTCTGGACGGTGCGCA CGGAGGCCGATCTGGCCGCCCTGAAACCCTACGGCGCCGCGATAATCTTCGAACACTTCAGCCCGGCGCTGGCGCTGGAC GCCATCGCGCCCTAG
Upstream 100 bases:
>100_bases AAGTGGGCGCGCATGCCCGCTCGGCCGTGGCCTGCCCGACCCTGCCGCTCGGTGTGGCCGTTGAAGTCGACGCGATCTTC GAGATCGCCTGAGGCACAAA
Downstream 100 bases:
>100_bases ATTTGAGGGCCATGGACGCTGCCCTCCCCCAGATAACTTCCGTCTCCTCCCTCGCCGGCATTGATCCGGCCGAGTGGAAT GCTGTCGCCAACCCGCCCGG
Product: glycerophosphoryl diester phosphodiesterase family protein
Products: NA
Alternate protein names: Glycerophosphoryl Diester Phosphodiesterase Family Protein; Glycerophosphoryl Diester Phosphodiesterase Protein; Glycerophosphoryl Diester Phosphodiesterase Family; Phosphodiesterase
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MARPFALKDFAYAHRGLWTKDGLPENSLGSFSAAADAGLGIELDLRPSADGEVMVFHDPLLQRMTGAEGQFENFPASTLK THRLNGGDEPVPSFDDLLSFWPQDLPVLAEMKIDGSTDPMAFAQTVGARLMDWPGLAAAMSFSDIAVRALPDGLMRGQLI GPSNQFGDAYFDSFARRAMADGIDYLAVHYTDAARAAAATADRGMPVVVWTVRTEADLAALKPYGAAIIFEHFSPALALD AIAP
Sequences:
>Translated_244_residues MARPFALKDFAYAHRGLWTKDGLPENSLGSFSAAADAGLGIELDLRPSADGEVMVFHDPLLQRMTGAEGQFENFPASTLK THRLNGGDEPVPSFDDLLSFWPQDLPVLAEMKIDGSTDPMAFAQTVGARLMDWPGLAAAMSFSDIAVRALPDGLMRGQLI GPSNQFGDAYFDSFARRAMADGIDYLAVHYTDAARAAAATADRGMPVVVWTVRTEADLAALKPYGAAIIFEHFSPALALD AIAP >Mature_243_residues ARPFALKDFAYAHRGLWTKDGLPENSLGSFSAAADAGLGIELDLRPSADGEVMVFHDPLLQRMTGAEGQFENFPASTLKT HRLNGGDEPVPSFDDLLSFWPQDLPVLAEMKIDGSTDPMAFAQTVGARLMDWPGLAAAMSFSDIAVRALPDGLMRGQLIG PSNQFGDAYFDSFARRAMADGIDYLAVHYTDAARAAAATADRGMPVVVWTVRTEADLAALKPYGAAIIFEHFSPALALDA IAP
Specific function: Unknown
COG id: COG0584
COG function: function code C; Glycerophosphoryl diester phosphodiesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26164; Mature: 26033
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPFALKDFAYAHRGLWTKDGLPENSLGSFSAAADAGLGIELDLRPSADGEVMVFHDPL CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCEEEEECHH LQRMTGAEGQFENFPASTLKTHRLNGGDEPVPSFDDLLSFWPQDLPVLAEMKIDGSTDPM HHHHCCCCCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCHH AFAQTVGARLMDWPGLAAAMSFSDIAVRALPDGLMRGQLIGPSNQFGDAYFDSFARRAMA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCHHHHHHHHHHHHH DGIDYLAVHYTDAARAAAATADRGMPVVVWTVRTEADLAALKPYGAAIIFEHFSPALALD CCCCEEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCHHHHCCCCEEEEEECCCCHHHHH AIAP CCCC >Mature Secondary Structure ARPFALKDFAYAHRGLWTKDGLPENSLGSFSAAADAGLGIELDLRPSADGEVMVFHDPL CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCEEEEECHH LQRMTGAEGQFENFPASTLKTHRLNGGDEPVPSFDDLLSFWPQDLPVLAEMKIDGSTDPM HHHHCCCCCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCHH AFAQTVGARLMDWPGLAAAMSFSDIAVRALPDGLMRGQLIGPSNQFGDAYFDSFARRAMA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCHHHHHHHHHHHHH DGIDYLAVHYTDAARAAAATADRGMPVVVWTVRTEADLAALKPYGAAIIFEHFSPALALD CCCCEEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCHHHHCCCCEEEEEECCCCHHHHH AIAP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA