Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114799871
Identifier: 114799871
GI number: 114799871
Start: 2389954
End: 2391114
Strand: Direct
Name: 114799871
Synonym: HNE_2289
Alternate gene names: NA
Gene position: 2389954-2391114 (Clockwise)
Preceding gene: 114797187
Following gene: 114799198
Centisome position: 64.51
GC content: 62.62
Gene sequence:
>1161_bases ATGGACGCTGCCCTCCCCCAGATAACTTCCGTCTCCTCCCTCGCCGGCATTGATCCGGCCGAGTGGAATGCTGTCGCCAA CCCGCCCGGCCTGCCTTACGATCCGTTCGTGAGCTGGGAGTTCCTTGAGGCTATGGAAAGCTCCGGCGCGGCCACCCCGC GCACCGGCTGGCGCGGCGGACATATCCTCGTGCGCGATGGCAATGACCGCCTGCGCGGCGCCATGCCGATGTGGTTCAAA TATCATTCGCGCGGCGAATTCGTGTTCGACCAGTCCTGGGCCGAAGCCTGGCAGCGGGCAGGCGGGGAGTATTACCCCAA GCTGCTCTGCGCCGTCCCGTTCACCCCGGTCACCGGCCGCCGCCGCCTCGTTGCGCCGGGGCCAGACGCGGAGCTTTACC GCGCCGCCCTGCTCGACGGGGCGCTTCAGCTGGCCGAGCAGACGGGCGTATCGTCCCTCCACATCAACTTCATCGAGGAC GAAGAAGCTCCGCTGTTTGAGAAAGCCGGCTTCCTTTCCCGCACCGATCAGCAGTTTCACTGGCGAAATGACGGGTACGG ATCATTTGACGATTTCCTCGCCAGTCTCTCCTCGGAGAAACGCAAGAACCTGCGCAAGGAGCGCGCCAAGGCGCAGGCGG GCCTCACCTTCCGCCATGTGCAGGGTGAGGAGATCGCCGAAGACCATCTCGACATCTTCTTCGAGTTCTACATGGACACG GGCAACCGCAAATGGGGCTCGCCCTATCTGACGCGCAAATCTTTCTCCATCCTCCGGGAACGGATGGCCAAGGACATTCT CTTCATCTTTGCCTGTGAGGGGGATGAGATCATCGCCGGGGCCATGAACCTTGTCGGCTCCGAGACGCTCTACGGCCGCT ATTGGGGCACGCTCGACGCGCGCCCGATGCTGCATTTCGAGACCTGCTATTACCAGGCCATCGATTACGCCATCAAGCAT GGCCTCAAGACCGTTGAAGCCGGCGCGCAGGGCGGCCACAAGCTCGCGCGCGGCTACGCGCCTGTTCTCACCCATTCGGC CCACTGGATTGCGCATCCGGGGTTTCGCGACGCTGTCTCCGATTACCTTGAGCGCGAGCGCGCAGCGGTTGACGAAGACA TGAACTATTTGCGAGATCGAACTCCGTTCAGGAAAGAATAG
Upstream 100 bases:
>100_bases CCGATCTGGCCGCCCTGAAACCCTACGGCGCCGCGATAATCTTCGAACACTTCAGCCCGGCGCTGGCGCTGGACGCCATC GCGCCCTAGATTTGAGGGCC
Downstream 100 bases:
>100_bases TAGATCACATGACCCTTCACGCAGCCTACGACCCAGACAACATCTTTGCGAAAATCCTGCGCGGCGACATGCCGAGCCTG AAAGTGTTCGAGGATGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MDAALPQITSVSSLAGIDPAEWNAVANPPGLPYDPFVSWEFLEAMESSGAATPRTGWRGGHILVRDGNDRLRGAMPMWFK YHSRGEFVFDQSWAEAWQRAGGEYYPKLLCAVPFTPVTGRRRLVAPGPDAELYRAALLDGALQLAEQTGVSSLHINFIED EEAPLFEKAGFLSRTDQQFHWRNDGYGSFDDFLASLSSEKRKNLRKERAKAQAGLTFRHVQGEEIAEDHLDIFFEFYMDT GNRKWGSPYLTRKSFSILRERMAKDILFIFACEGDEIIAGAMNLVGSETLYGRYWGTLDARPMLHFETCYYQAIDYAIKH GLKTVEAGAQGGHKLARGYAPVLTHSAHWIAHPGFRDAVSDYLERERAAVDEDMNYLRDRTPFRKE
Sequences:
>Translated_386_residues MDAALPQITSVSSLAGIDPAEWNAVANPPGLPYDPFVSWEFLEAMESSGAATPRTGWRGGHILVRDGNDRLRGAMPMWFK YHSRGEFVFDQSWAEAWQRAGGEYYPKLLCAVPFTPVTGRRRLVAPGPDAELYRAALLDGALQLAEQTGVSSLHINFIED EEAPLFEKAGFLSRTDQQFHWRNDGYGSFDDFLASLSSEKRKNLRKERAKAQAGLTFRHVQGEEIAEDHLDIFFEFYMDT GNRKWGSPYLTRKSFSILRERMAKDILFIFACEGDEIIAGAMNLVGSETLYGRYWGTLDARPMLHFETCYYQAIDYAIKH GLKTVEAGAQGGHKLARGYAPVLTHSAHWIAHPGFRDAVSDYLERERAAVDEDMNYLRDRTPFRKE >Mature_386_residues MDAALPQITSVSSLAGIDPAEWNAVANPPGLPYDPFVSWEFLEAMESSGAATPRTGWRGGHILVRDGNDRLRGAMPMWFK YHSRGEFVFDQSWAEAWQRAGGEYYPKLLCAVPFTPVTGRRRLVAPGPDAELYRAALLDGALQLAEQTGVSSLHINFIED EEAPLFEKAGFLSRTDQQFHWRNDGYGSFDDFLASLSSEKRKNLRKERAKAQAGLTFRHVQGEEIAEDHLDIFFEFYMDT GNRKWGSPYLTRKSFSILRERMAKDILFIFACEGDEIIAGAMNLVGSETLYGRYWGTLDARPMLHFETCYYQAIDYAIKH GLKTVEAGAQGGHKLARGYAPVLTHSAHWIAHPGFRDAVSDYLERERAAVDEDMNYLRDRTPFRKE
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43665; Mature: 43665
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAALPQITSVSSLAGIDPAEWNAVANPPGLPYDPFVSWEFLEAMESSGAATPRTGWRGG CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC HILVRDGNDRLRGAMPMWFKYHSRGEFVFDQSWAEAWQRAGGEYYPKLLCAVPFTPVTGR EEEEECCCCHHHCCCCHHEEECCCCCEEECHHHHHHHHHCCCCCCCHHHEECCCCCCCCC RRLVAPGPDAELYRAALLDGALQLAEQTGVSSLHINFIEDEEAPLFEKAGFLSRTDQQFH CEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCEE WRNDGYGSFDDFLASLSSEKRKNLRKERAKAQAGLTFRHVQGEEIAEDHLDIFFEFYMDT ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHC GNRKWGSPYLTRKSFSILRERMAKDILFIFACEGDEIIAGAMNLVGSETLYGRYWGTLDA CCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCCC RPMLHFETCYYQAIDYAIKHGLKTVEAGAQGGHKLARGYAPVLTHSAHWIAHPGFRDAVS CCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHCCHHHHHCCCCEEECCCHHHHHH DYLERERAAVDEDMNYLRDRTPFRKE HHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDAALPQITSVSSLAGIDPAEWNAVANPPGLPYDPFVSWEFLEAMESSGAATPRTGWRGG CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC HILVRDGNDRLRGAMPMWFKYHSRGEFVFDQSWAEAWQRAGGEYYPKLLCAVPFTPVTGR EEEEECCCCHHHCCCCHHEEECCCCCEEECHHHHHHHHHCCCCCCCHHHEECCCCCCCCC RRLVAPGPDAELYRAALLDGALQLAEQTGVSSLHINFIEDEEAPLFEKAGFLSRTDQQFH CEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCEE WRNDGYGSFDDFLASLSSEKRKNLRKERAKAQAGLTFRHVQGEEIAEDHLDIFFEFYMDT ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHC GNRKWGSPYLTRKSFSILRERMAKDILFIFACEGDEIIAGAMNLVGSETLYGRYWGTLDA CCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCCC RPMLHFETCYYQAIDYAIKHGLKTVEAGAQGGHKLARGYAPVLTHSAHWIAHPGFRDAVS CCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHCCHHHHHCCCCEEECCCHHHHHH DYLERERAAVDEDMNYLRDRTPFRKE HHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA