Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114799871

Identifier: 114799871

GI number: 114799871

Start: 2389954

End: 2391114

Strand: Direct

Name: 114799871

Synonym: HNE_2289

Alternate gene names: NA

Gene position: 2389954-2391114 (Clockwise)

Preceding gene: 114797187

Following gene: 114799198

Centisome position: 64.51

GC content: 62.62

Gene sequence:

>1161_bases
ATGGACGCTGCCCTCCCCCAGATAACTTCCGTCTCCTCCCTCGCCGGCATTGATCCGGCCGAGTGGAATGCTGTCGCCAA
CCCGCCCGGCCTGCCTTACGATCCGTTCGTGAGCTGGGAGTTCCTTGAGGCTATGGAAAGCTCCGGCGCGGCCACCCCGC
GCACCGGCTGGCGCGGCGGACATATCCTCGTGCGCGATGGCAATGACCGCCTGCGCGGCGCCATGCCGATGTGGTTCAAA
TATCATTCGCGCGGCGAATTCGTGTTCGACCAGTCCTGGGCCGAAGCCTGGCAGCGGGCAGGCGGGGAGTATTACCCCAA
GCTGCTCTGCGCCGTCCCGTTCACCCCGGTCACCGGCCGCCGCCGCCTCGTTGCGCCGGGGCCAGACGCGGAGCTTTACC
GCGCCGCCCTGCTCGACGGGGCGCTTCAGCTGGCCGAGCAGACGGGCGTATCGTCCCTCCACATCAACTTCATCGAGGAC
GAAGAAGCTCCGCTGTTTGAGAAAGCCGGCTTCCTTTCCCGCACCGATCAGCAGTTTCACTGGCGAAATGACGGGTACGG
ATCATTTGACGATTTCCTCGCCAGTCTCTCCTCGGAGAAACGCAAGAACCTGCGCAAGGAGCGCGCCAAGGCGCAGGCGG
GCCTCACCTTCCGCCATGTGCAGGGTGAGGAGATCGCCGAAGACCATCTCGACATCTTCTTCGAGTTCTACATGGACACG
GGCAACCGCAAATGGGGCTCGCCCTATCTGACGCGCAAATCTTTCTCCATCCTCCGGGAACGGATGGCCAAGGACATTCT
CTTCATCTTTGCCTGTGAGGGGGATGAGATCATCGCCGGGGCCATGAACCTTGTCGGCTCCGAGACGCTCTACGGCCGCT
ATTGGGGCACGCTCGACGCGCGCCCGATGCTGCATTTCGAGACCTGCTATTACCAGGCCATCGATTACGCCATCAAGCAT
GGCCTCAAGACCGTTGAAGCCGGCGCGCAGGGCGGCCACAAGCTCGCGCGCGGCTACGCGCCTGTTCTCACCCATTCGGC
CCACTGGATTGCGCATCCGGGGTTTCGCGACGCTGTCTCCGATTACCTTGAGCGCGAGCGCGCAGCGGTTGACGAAGACA
TGAACTATTTGCGAGATCGAACTCCGTTCAGGAAAGAATAG

Upstream 100 bases:

>100_bases
CCGATCTGGCCGCCCTGAAACCCTACGGCGCCGCGATAATCTTCGAACACTTCAGCCCGGCGCTGGCGCTGGACGCCATC
GCGCCCTAGATTTGAGGGCC

Downstream 100 bases:

>100_bases
TAGATCACATGACCCTTCACGCAGCCTACGACCCAGACAACATCTTTGCGAAAATCCTGCGCGGCGACATGCCGAGCCTG
AAAGTGTTCGAGGATGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MDAALPQITSVSSLAGIDPAEWNAVANPPGLPYDPFVSWEFLEAMESSGAATPRTGWRGGHILVRDGNDRLRGAMPMWFK
YHSRGEFVFDQSWAEAWQRAGGEYYPKLLCAVPFTPVTGRRRLVAPGPDAELYRAALLDGALQLAEQTGVSSLHINFIED
EEAPLFEKAGFLSRTDQQFHWRNDGYGSFDDFLASLSSEKRKNLRKERAKAQAGLTFRHVQGEEIAEDHLDIFFEFYMDT
GNRKWGSPYLTRKSFSILRERMAKDILFIFACEGDEIIAGAMNLVGSETLYGRYWGTLDARPMLHFETCYYQAIDYAIKH
GLKTVEAGAQGGHKLARGYAPVLTHSAHWIAHPGFRDAVSDYLERERAAVDEDMNYLRDRTPFRKE

Sequences:

>Translated_386_residues
MDAALPQITSVSSLAGIDPAEWNAVANPPGLPYDPFVSWEFLEAMESSGAATPRTGWRGGHILVRDGNDRLRGAMPMWFK
YHSRGEFVFDQSWAEAWQRAGGEYYPKLLCAVPFTPVTGRRRLVAPGPDAELYRAALLDGALQLAEQTGVSSLHINFIED
EEAPLFEKAGFLSRTDQQFHWRNDGYGSFDDFLASLSSEKRKNLRKERAKAQAGLTFRHVQGEEIAEDHLDIFFEFYMDT
GNRKWGSPYLTRKSFSILRERMAKDILFIFACEGDEIIAGAMNLVGSETLYGRYWGTLDARPMLHFETCYYQAIDYAIKH
GLKTVEAGAQGGHKLARGYAPVLTHSAHWIAHPGFRDAVSDYLERERAAVDEDMNYLRDRTPFRKE
>Mature_386_residues
MDAALPQITSVSSLAGIDPAEWNAVANPPGLPYDPFVSWEFLEAMESSGAATPRTGWRGGHILVRDGNDRLRGAMPMWFK
YHSRGEFVFDQSWAEAWQRAGGEYYPKLLCAVPFTPVTGRRRLVAPGPDAELYRAALLDGALQLAEQTGVSSLHINFIED
EEAPLFEKAGFLSRTDQQFHWRNDGYGSFDDFLASLSSEKRKNLRKERAKAQAGLTFRHVQGEEIAEDHLDIFFEFYMDT
GNRKWGSPYLTRKSFSILRERMAKDILFIFACEGDEIIAGAMNLVGSETLYGRYWGTLDARPMLHFETCYYQAIDYAIKH
GLKTVEAGAQGGHKLARGYAPVLTHSAHWIAHPGFRDAVSDYLERERAAVDEDMNYLRDRTPFRKE

Specific function: Unknown

COG id: COG3146

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43665; Mature: 43665

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAALPQITSVSSLAGIDPAEWNAVANPPGLPYDPFVSWEFLEAMESSGAATPRTGWRGG
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
HILVRDGNDRLRGAMPMWFKYHSRGEFVFDQSWAEAWQRAGGEYYPKLLCAVPFTPVTGR
EEEEECCCCHHHCCCCHHEEECCCCCEEECHHHHHHHHHCCCCCCCHHHEECCCCCCCCC
RRLVAPGPDAELYRAALLDGALQLAEQTGVSSLHINFIEDEEAPLFEKAGFLSRTDQQFH
CEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCEE
WRNDGYGSFDDFLASLSSEKRKNLRKERAKAQAGLTFRHVQGEEIAEDHLDIFFEFYMDT
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHC
GNRKWGSPYLTRKSFSILRERMAKDILFIFACEGDEIIAGAMNLVGSETLYGRYWGTLDA
CCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCCC
RPMLHFETCYYQAIDYAIKHGLKTVEAGAQGGHKLARGYAPVLTHSAHWIAHPGFRDAVS
CCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHCCHHHHHCCCCEEECCCHHHHHH
DYLERERAAVDEDMNYLRDRTPFRKE
HHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDAALPQITSVSSLAGIDPAEWNAVANPPGLPYDPFVSWEFLEAMESSGAATPRTGWRGG
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
HILVRDGNDRLRGAMPMWFKYHSRGEFVFDQSWAEAWQRAGGEYYPKLLCAVPFTPVTGR
EEEEECCCCHHHCCCCHHEEECCCCCEEECHHHHHHHHHCCCCCCCHHHEECCCCCCCCC
RRLVAPGPDAELYRAALLDGALQLAEQTGVSSLHINFIEDEEAPLFEKAGFLSRTDQQFH
CEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCEE
WRNDGYGSFDDFLASLSSEKRKNLRKERAKAQAGLTFRHVQGEEIAEDHLDIFFEFYMDT
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHC
GNRKWGSPYLTRKSFSILRERMAKDILFIFACEGDEIIAGAMNLVGSETLYGRYWGTLDA
CCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCCC
RPMLHFETCYYQAIDYAIKHGLKTVEAGAQGGHKLARGYAPVLTHSAHWIAHPGFRDAVS
CCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHCCHHHHHCCCCEEECCCHHHHHH
DYLERERAAVDEDMNYLRDRTPFRKE
HHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA