Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is yegE [C]
Identifier: 114797173
GI number: 114797173
Start: 427573
End: 428574
Strand: Direct
Name: yegE [C]
Synonym: HNE_0429
Alternate gene names: 114797173
Gene position: 427573-428574 (Clockwise)
Preceding gene: 114799954
Following gene: 114797968
Centisome position: 11.54
GC content: 61.28
Gene sequence:
>1002_bases ATGCAAACCATCCAGTTAGATCGGTCGATCTGGAGCGAAAAACATCTGCGCTTTGCCATTGAAGGCGCCGGGGTTGCGTT GTGGGCGTGGAATGTCGATACGGACGAACTCATCCTTGATGAGTGTGCCTACGACATGTGGGGTGTCCCCCGTGATACGC CGGTTAGGTTCGAGGATCTGTCGGCCCATATCCATCCTGCCGACCGCGACCGGGTTCGGGCTGCCTTCGCTGCCAGCCGG GCCGCTATCGGGCAGTATGAAATCGATTTCCGCATTCTGATCGGCGATGAGGTCCGCTGGGTCTCTGCGCGCGGTCAGGG CGAAGATGACGGCATGGTTGAGCGGACGATGTTCGGCATCTTCCTGAACGTCACCGGCCGCAAACAGGCTGAGGAAAGCA ATGAGTTGCTTGCCGGCGAGATGAGCCACCGGGTCAAAAACCTTCTGGCCATTGCGTCTGGCCTCACATCCATCACATCC AGGTCCGCCTCTTCCACCGAAGACATGGCCAAGCAGCTGACTAACCGTCTTACGGCGCTGGGGCGCGCGCATGACCTGGT GCGCCCGCTACCCGGCCACGCCAAGACCGATGCGCTGCTGGGCGACCTCCTGTCCGTATTGCTGGCGCCTTACGATGACC TTGGCGCGTTCAGCGGGCGTATCCGTGTCTCCGTTCCGCGCATGGGCGTGGGCGCCGCGTCCGCGACCACGCTTTCGCTG GTTATCCATGAGCTGGCGACTAATTCGCTCAAATATGGCGCGCTCTCCTGCGATACCGGCACACTCGACGTGTCCTCGAC CAGCCATGACGATGAAGTCGTCGTAGTCTGGACCGAAAGGGGTGGCCCGCCCGTCAAGACGCCCACAGGGCAGGGCGGTT TTGGCAGCAAGCTCATCAACCGGACCATGTCGATGCAGCTGGGCGGCACCCTCAGCTGCGACTGGGCTGAGGAGGGGGTC ATTGTGACCCTGAAAATGAATAAGGAGAGCCTGGAGCGCTGA
Upstream 100 bases:
>100_bases AGACCAATCGCAGCGCTCCGCCGATGGATCGTTTGAGGCGATTCAAAAAAACAGATTCTCCGGCGCAAACGTGCGAAGCT GGGTTTGAGGAGACTGATCC
Downstream 100 bases:
>100_bases AAATCAGGGGCGTTGCCTTCACGCGCCCCCTTGATTCCTTGCGCTGGCTCCGCCATAAGCCGCCACTTCCGGACTTTGGG GCGACGGCATTGCCCCCTGT
Product: putative sensory box sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MQTIQLDRSIWSEKHLRFAIEGAGVALWAWNVDTDELILDECAYDMWGVPRDTPVRFEDLSAHIHPADRDRVRAAFAASR AAIGQYEIDFRILIGDEVRWVSARGQGEDDGMVERTMFGIFLNVTGRKQAEESNELLAGEMSHRVKNLLAIASGLTSITS RSASSTEDMAKQLTNRLTALGRAHDLVRPLPGHAKTDALLGDLLSVLLAPYDDLGAFSGRIRVSVPRMGVGAASATTLSL VIHELATNSLKYGALSCDTGTLDVSSTSHDDEVVVVWTERGGPPVKTPTGQGGFGSKLINRTMSMQLGGTLSCDWAEEGV IVTLKMNKESLER
Sequences:
>Translated_333_residues MQTIQLDRSIWSEKHLRFAIEGAGVALWAWNVDTDELILDECAYDMWGVPRDTPVRFEDLSAHIHPADRDRVRAAFAASR AAIGQYEIDFRILIGDEVRWVSARGQGEDDGMVERTMFGIFLNVTGRKQAEESNELLAGEMSHRVKNLLAIASGLTSITS RSASSTEDMAKQLTNRLTALGRAHDLVRPLPGHAKTDALLGDLLSVLLAPYDDLGAFSGRIRVSVPRMGVGAASATTLSL VIHELATNSLKYGALSCDTGTLDVSSTSHDDEVVVVWTERGGPPVKTPTGQGGFGSKLINRTMSMQLGGTLSCDWAEEGV IVTLKMNKESLER >Mature_333_residues MQTIQLDRSIWSEKHLRFAIEGAGVALWAWNVDTDELILDECAYDMWGVPRDTPVRFEDLSAHIHPADRDRVRAAFAASR AAIGQYEIDFRILIGDEVRWVSARGQGEDDGMVERTMFGIFLNVTGRKQAEESNELLAGEMSHRVKNLLAIASGLTSITS RSASSTEDMAKQLTNRLTALGRAHDLVRPLPGHAKTDALLGDLLSVLLAPYDDLGAFSGRIRVSVPRMGVGAASATTLSL VIHELATNSLKYGALSCDTGTLDVSSTSHDDEVVVVWTERGGPPVKTPTGQGGFGSKLINRTMSMQLGGTLSCDWAEEGV IVTLKMNKESLER
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 36209; Mature: 36209
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTIQLDRSIWSEKHLRFAIEGAGVALWAWNVDTDELILDECAYDMWGVPRDTPVRFEDL CCEEECCHHHHCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHC SAHIHPADRDRVRAAFAASRAAIGQYEIDFRILIGDEVRWVSARGQGEDDGMVERTMFGI CCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCCEEEEECCCCCCCCCHHHHEEEEE FLNVTGRKQAEESNELLAGEMSHRVKNLLAIASGLTSITSRSASSTEDMAKQLTNRLTAL EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GRAHDLVRPLPGHAKTDALLGDLLSVLLAPYDDLGAFSGRIRVSVPRMGVGAASATTLSL HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHH VIHELATNSLKYGALSCDTGTLDVSSTSHDDEVVVVWTERGGPPVKTPTGQGGFGSKLIN HHHHHHCCCCCCCEEECCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHH RTMSMQLGGTLSCDWAEEGVIVTLKMNKESLER HHHHEECCCEEEECCCCCCEEEEEEECHHHHCC >Mature Secondary Structure MQTIQLDRSIWSEKHLRFAIEGAGVALWAWNVDTDELILDECAYDMWGVPRDTPVRFEDL CCEEECCHHHHCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHC SAHIHPADRDRVRAAFAASRAAIGQYEIDFRILIGDEVRWVSARGQGEDDGMVERTMFGI CCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCCEEEEECCCCCCCCCHHHHEEEEE FLNVTGRKQAEESNELLAGEMSHRVKNLLAIASGLTSITSRSASSTEDMAKQLTNRLTAL EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GRAHDLVRPLPGHAKTDALLGDLLSVLLAPYDDLGAFSGRIRVSVPRMGVGAASATTLSL HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHH VIHELATNSLKYGALSCDTGTLDVSSTSHDDEVVVVWTERGGPPVKTPTGQGGFGSKLIN HHHHHHCCCCCCCEEECCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHH RTMSMQLGGTLSCDWAEEGVIVTLKMNKESLER HHHHEECCCEEEECCCCCCEEEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA