Click here to switch to the map view.

The map label for this gene is 114331703

Identifier: 114331703

GI number: 114331703

Start: 1818219

End: 1818503

Strand: Direct

Name: 114331703

Synonym: Neut_1721

Alternate gene names: NA

Gene position: 1818219-1818503 (Clockwise)

Preceding gene: 114331702

Following gene: 114331704

Centisome position: 68.33

GC content: 45.61

Gene sequence:

>285_bases
GTGTATCTGAAAGGTTACGTCACGATGCCTGAATTGCTGATAGGTCTGACAGAATACTTTGTGCTTTACAACACAGAAAG
ACCGCACCAATCGCTGGGCTACGACACGCCAGATCAGGTATACCGTACAGCGAGTGGTGGCGGAGCAAGGATTGTGGACA
AATATAGTGAGAAAGAAAAATCTCACACAGAAGTAGAAACAAAAAAAGAAACCGAAAACCGGGGCAGCGCCGTTCCGCTG
CATGAAGAAGGTTACCCTCTTAAACTCGATACATTATTGTCTTGA

Upstream 100 bases:

>100_bases
TGCTGTTAAAAAAAGAAATCGCCATCAGCATGGACGGGCGTGGCCGGGCCTGGATAACATCTTTGTGGAACGGCTCTGGC
GCAGCGTCAAACACGAGGAC

Downstream 100 bases:

>100_bases
CGGAGGGGTCCACTATAGACAGCACGATGAAACAAGTGAGATTTCAGTCGATAAAGGGGTGATCAAGCAGATCGGAAAAA
ACCTGCCCAAGGCCGACGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Subunit

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MYLKGYVTMPELLIGLTEYFVLYNTERPHQSLGYDTPDQVYRTASGGGARIVDKYSEKEKSHTEVETKKETENRGSAVPL
HEEGYPLKLDTLLS

Sequences:

>Translated_94_residues
MYLKGYVTMPELLIGLTEYFVLYNTERPHQSLGYDTPDQVYRTASGGGARIVDKYSEKEKSHTEVETKKETENRGSAVPL
HEEGYPLKLDTLLS
>Mature_94_residues
MYLKGYVTMPELLIGLTEYFVLYNTERPHQSLGYDTPDQVYRTASGGGARIVDKYSEKEKSHTEVETKKETENRGSAVPL
HEEGYPLKLDTLLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10685; Mature: 10685

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLKGYVTMPELLIGLTEYFVLYNTERPHQSLGYDTPDQVYRTASGGGARIVDKYSEKEK
CEECCCCCHHHHHHHHHHHHEEECCCCCHHHCCCCCHHHHEECCCCCCCEEHHHHHHHHH
SHTEVETKKETENRGSAVPLHEEGYPLKLDTLLS
HHCCCCCCHHHCCCCCCCCCCCCCCCEEHHCCCC
>Mature Secondary Structure
MYLKGYVTMPELLIGLTEYFVLYNTERPHQSLGYDTPDQVYRTASGGGARIVDKYSEKEK
CEECCCCCHHHHHHHHHHHHEEECCCCCHHHCCCCCHHHHEECCCCCCCEEHHHHHHHHH
SHTEVETKKETENRGSAVPLHEEGYPLKLDTLLS
HHCCCCCCHHHCCCCCCCCCCCCCCCEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA