Click here to switch to the map view.

The map label for this gene is ybgI [C]

Identifier: 114331670

GI number: 114331670

Start: 1781666

End: 1782412

Strand: Direct

Name: ybgI [C]

Synonym: Neut_1686

Alternate gene names: 114331670

Gene position: 1781666-1782412 (Clockwise)

Preceding gene: 114331666

Following gene: 114331671

Centisome position: 66.95

GC content: 49.13

Gene sequence:

>747_bases
ATGCACCAAAATATACTGGAAAATTACCTGAATGATCTGCTGGACGTTCAGCAATTCCGTGATTATTGTCCCAACGGGTT
ACAGGTGGAAGGGCGAGCTTCGATTCAAACGCTCGTCAGCGGTGTAACTGCTTCCCAAGTTTTGATACAGGCAGCGCTGG
ATTTGCATGCGGATGCCATCATCGTGCACCATGGCTATTTTTGGCGCGGAGAAGATACCTGCCTGCGCGGCATCAAGCGT
CACCGTATCGCCACGCTCATCAAGCATGACATCAATCTTTACGCTTACCATCTGCCTCTGGATGCCCATGCTGATCTGGG
CAACAATACCTTGCTCGGAAAAAAGCTGGGAATAAAGGAAGAAGGCCGTTTCGGCGAACAGAATATCGCTGCTTACGGTT
ATTTTCAGAAACCAGCCAGCCTTGACGAGCTGGATGGTTTACTGAGTTCAGTGCTTGGCCGGAAACCACTAATAATCGGC
AATCCGCTTAAACCTATCCGGCGTATTGCCTGGTGTACCGGAGCAGCTCAAGGATATTTTGAGGAAGCTATCCGGTTGGG
CGTAGATGCATTTATCACCGGTGAAATTTCTGAACAGAACGTACATACAGCCAGAGAATCCGGCACGGCCTTCATCTCAG
CCGGGCATCACGCCACCGAACGCTATGGAATTCAGGCGCTTGGTGATCATATCGCACAAAAATTCAGTATTGCACACCAT
TTTATTGATGCAGAAAACCCTGTATGA

Upstream 100 bases:

>100_bases
AACAAAAAAGATGGCGAGGAGAACAGTGATGGTTTGTGTGAAAAGCAGCCAGAGTTTTTGCATGGAAAATCCTACATCCC
AAATGAACAAAAAAAGTATT

Downstream 100 bases:

>100_bases
CTAATCCATTAGCAATGCAGCAGAACAAAAGCAGGCAGCCGCTCTCAAATAGCAAACAAGGCATGATCTATTTTTTTTCA
TCCTTGTTATCCAGTTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MHQNILENYLNDLLDVQQFRDYCPNGLQVEGRASIQTLVSGVTASQVLIQAALDLHADAIIVHHGYFWRGEDTCLRGIKR
HRIATLIKHDINLYAYHLPLDAHADLGNNTLLGKKLGIKEEGRFGEQNIAAYGYFQKPASLDELDGLLSSVLGRKPLIIG
NPLKPIRRIAWCTGAAQGYFEEAIRLGVDAFITGEISEQNVHTARESGTAFISAGHHATERYGIQALGDHIAQKFSIAHH
FIDAENPV

Sequences:

>Translated_248_residues
MHQNILENYLNDLLDVQQFRDYCPNGLQVEGRASIQTLVSGVTASQVLIQAALDLHADAIIVHHGYFWRGEDTCLRGIKR
HRIATLIKHDINLYAYHLPLDAHADLGNNTLLGKKLGIKEEGRFGEQNIAAYGYFQKPASLDELDGLLSSVLGRKPLIIG
NPLKPIRRIAWCTGAAQGYFEEAIRLGVDAFITGEISEQNVHTARESGTAFISAGHHATERYGIQALGDHIAQKFSIAHH
FIDAENPV
>Mature_248_residues
MHQNILENYLNDLLDVQQFRDYCPNGLQVEGRASIQTLVSGVTASQVLIQAALDLHADAIIVHHGYFWRGEDTCLRGIKR
HRIATLIKHDINLYAYHLPLDAHADLGNNTLLGKKLGIKEEGRFGEQNIAAYGYFQKPASLDELDGLLSSVLGRKPLIIG
NPLKPIRRIAWCTGAAQGYFEEAIRLGVDAFITGEISEQNVHTARESGTAFISAGHHATERYGIQALGDHIAQKFSIAHH
FIDAENPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=248, Percent_Identity=49.1935483870968, Blast_Score=249, Evalue=1e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27439; Mature: 27439

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQNILENYLNDLLDVQQFRDYCPNGLQVEGRASIQTLVSGVTASQVLIQAALDLHADAI
CCHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IVHHGYFWRGEDTCLRGIKRHRIATLIKHDINLYAYHLPLDAHADLGNNTLLGKKLGIKE
EEECCEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEECCCCCCCC
EGRFGEQNIAAYGYFQKPASLDELDGLLSSVLGRKPLIIGNPLKPIRRIAWCTGAAQGYF
CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHH
EEAIRLGVDAFITGEISEQNVHTARESGTAFISAGHHATERYGIQALGDHIAQKFSIAHH
HHHHHHCCHHEEECCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
FIDAENPV
HCCCCCCC
>Mature Secondary Structure
MHQNILENYLNDLLDVQQFRDYCPNGLQVEGRASIQTLVSGVTASQVLIQAALDLHADAI
CCHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IVHHGYFWRGEDTCLRGIKRHRIATLIKHDINLYAYHLPLDAHADLGNNTLLGKKLGIKE
EEECCEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEECCCCCCCC
EGRFGEQNIAAYGYFQKPASLDELDGLLSSVLGRKPLIIGNPLKPIRRIAWCTGAAQGYF
CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHH
EEAIRLGVDAFITGEISEQNVHTARESGTAFISAGHHATERYGIQALGDHIAQKFSIAHH
HHHHHHCCHHEEECCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
FIDAENPV
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]