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The map label for this gene is 114331417

Identifier: 114331417

GI number: 114331417

Start: 1507790

End: 1508284

Strand: Reverse

Name: 114331417

Synonym: Neut_1428

Alternate gene names: NA

Gene position: 1508284-1507790 (Counterclockwise)

Preceding gene: 114331418

Following gene: 114331416

Centisome position: 56.68

GC content: 49.29

Gene sequence:

>495_bases
ATGATAACGTTGCGAGCTTTACTGTCCATCTTGCTGGTATTGAATCTGGCTGCCTGTGGCTTCAAGTTGCGCGGGCAGGT
TTCCGAACTTCCTTTTGAGCGGATCTATATTAGAGCGCCTGCAGGGATGACTATTGGCTCTGATCTTGAGCGAGTAATTA
CTACCCATACGCAAGCACGAGTAGTAAAGAAGATCGAAAAATCCGACGCAGTTGTTCAGATTGTGCATGCGATCCGGGAA
AAAAGAATTCTTTCTCTCTCGGAGGGAGGAAGGGTACGTGAGTTTGAGCTAATTTACCGGGTAGCTGCTCGGCTGCTGGA
TTCACATAATACCGAGCTGGCACCCTTGCAGGAAATCAGGTTGACACGCATTCTTCCGTACCTGGATGCACAGGAGCTGG
CCAAGGCAGCAGAGGAAGAAATGCTGTACAAGGATATGCAGAAAGATGCCGTACAACAGATTCTTCGCCAGATTACGGCT
GTTACCCTCGGGTGA

Upstream 100 bases:

>100_bases
CATGTTCAGAGGAATATTGCCGGGCAGCCAATCAGGAAGGTAGTTATCGTGCCGGGAAGACTGGTCAATATTGTTGTTTA
ACAAAACAGGTATTTTGCGG

Downstream 100 bases:

>100_bases
GATGTGTATAACGCATGCGACTAGATCCGAAGCCTGTGACCAGTCAACCTGGTGAAGGTGTTGCCTCTCTGTATGTTGTG
CTGGGGGATGAGTTACTGTT

Product: rare lipoprotein B

Products: NA

Alternate protein names: Lipoprotein; Lipoprotein B Transmembrane; Lipoprotein B; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane Protein

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MITLRALLSILLVLNLAACGFKLRGQVSELPFERIYIRAPAGMTIGSDLERVITTHTQARVVKKIEKSDAVVQIVHAIRE
KRILSLSEGGRVREFELIYRVAARLLDSHNTELAPLQEIRLTRILPYLDAQELAKAAEEEMLYKDMQKDAVQQILRQITA
VTLG

Sequences:

>Translated_164_residues
MITLRALLSILLVLNLAACGFKLRGQVSELPFERIYIRAPAGMTIGSDLERVITTHTQARVVKKIEKSDAVVQIVHAIRE
KRILSLSEGGRVREFELIYRVAARLLDSHNTELAPLQEIRLTRILPYLDAQELAKAAEEEMLYKDMQKDAVQQILRQITA
VTLG
>Mature_164_residues
MITLRALLSILLVLNLAACGFKLRGQVSELPFERIYIRAPAGMTIGSDLERVITTHTQARVVKKIEKSDAVVQIVHAIRE
KRILSLSEGGRVREFELIYRVAARLLDSHNTELAPLQEIRLTRILPYLDAQELAKAAEEEMLYKDMQKDAVQQILRQITA
VTLG

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18518; Mature: 18518

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLRALLSILLVLNLAACGFKLRGQVSELPFERIYIRAPAGMTIGSDLERVITTHTQAR
CCHHHHHHHHHHHHHHHHHCHHHCCCHHHCCHHHEEEECCCCCCCHHHHHHHHHHHHHHH
VVKKIEKSDAVVQIVHAIREKRILSLSEGGRVREFELIYRVAARLLDSHNTELAPLQEIR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LTRILPYLDAQELAKAAEEEMLYKDMQKDAVQQILRQITAVTLG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MITLRALLSILLVLNLAACGFKLRGQVSELPFERIYIRAPAGMTIGSDLERVITTHTQAR
CCHHHHHHHHHHHHHHHHHCHHHCCCHHHCCHHHEEEECCCCCCCHHHHHHHHHHHHHHH
VVKKIEKSDAVVQIVHAIREKRILSLSEGGRVREFELIYRVAARLLDSHNTELAPLQEIR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LTRILPYLDAQELAKAAEEEMLYKDMQKDAVQQILRQITAVTLG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA