Click here to switch to the map view.

The map label for this gene is 114331411

Identifier: 114331411

GI number: 114331411

Start: 1500515

End: 1500985

Strand: Reverse

Name: 114331411

Synonym: Neut_1421

Alternate gene names: NA

Gene position: 1500985-1500515 (Counterclockwise)

Preceding gene: 114331415

Following gene: 114331404

Centisome position: 56.41

GC content: 53.29

Gene sequence:

>471_bases
GTGGACGCGCAGAGCGTGAAGAACACGGACACGGCGGGCCAGAAGGGCTATGACGCAGGCAAGAAGGTATCAGGCATCAA
GCGTCATATCGCGGTAGATACCCAGGGTTTGCCGCATGCTATTGCGGTAACCACGGCAGAAGTGACCGATCGCAAAGGAG
CGTTGCAGGCTCTCAAGCGCTGCAAACCGAACTTGAAGCAAATCCAAAGTCTGCTGTGTGATAGCGGCTATGTCGGTCAG
CCTTTTGCCCAGGGCGTCAAGGACATCCTGGGCAAGCACGTGACAGTGCAGATTGCCAGGCGTAGTGAATTGCACACGTT
CAAGGTTATCCCCAAGCGCTGGATCGTCGAGCGCAGCTTTGCCTGGCTGGAGAAGAACCGAAGGTTATGGAAAAATTGTG
AGCGTAAACTTAACACCAGCTTGCAGTTTATTCATCTGGCCTTCATGGCACTGATACTCAGAAGATCATAA

Upstream 100 bases:

>100_bases
GACCAGGATGGCGTCAGCCTGTTGGAGCAGGCGTTAAAAAAATCAGGTTGGCGCGGCCCGAGAGAAGTTGGGGCGCAACG
CTTGCAGCACGTTCCTGATC

Downstream 100 bases:

>100_bases
ACAGATTCTAAGGCGCATACTAAAGACAGAGCGTAATAAATTCTTGGAAAGATAATTGACATTGGTGCCGGGATGGACTA
CTACTTCAACCGCGTTATCA

Product: transposase, IS4 family protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; IS5 Family Transposase; Transposase IS5 Family Protein; Transposase Of; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase-Like Protein; Isxo3 Transposase Protein; Transposase Fragment; ISXo3 Transposase ORF B; Transposase And Inactivated Derivatives; IS4 Insertion Sequence Transposase Protein; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; Transposase Is4 Family; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Transposase Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MDAQSVKNTDTAGQKGYDAGKKVSGIKRHIAVDTQGLPHAIAVTTAEVTDRKGALQALKRCKPNLKQIQSLLCDSGYVGQ
PFAQGVKDILGKHVTVQIARRSELHTFKVIPKRWIVERSFAWLEKNRRLWKNCERKLNTSLQFIHLAFMALILRRS

Sequences:

>Translated_156_residues
MDAQSVKNTDTAGQKGYDAGKKVSGIKRHIAVDTQGLPHAIAVTTAEVTDRKGALQALKRCKPNLKQIQSLLCDSGYVGQ
PFAQGVKDILGKHVTVQIARRSELHTFKVIPKRWIVERSFAWLEKNRRLWKNCERKLNTSLQFIHLAFMALILRRS
>Mature_156_residues
MDAQSVKNTDTAGQKGYDAGKKVSGIKRHIAVDTQGLPHAIAVTTAEVTDRKGALQALKRCKPNLKQIQSLLCDSGYVGQ
PFAQGVKDILGKHVTVQIARRSELHTFKVIPKRWIVERSFAWLEKNRRLWKNCERKLNTSLQFIHLAFMALILRRS

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17605; Mature: 17605

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAQSVKNTDTAGQKGYDAGKKVSGIKRHIAVDTQGLPHAIAVTTAEVTDRKGALQALKR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHH
CKPNLKQIQSLLCDSGYVGQPFAQGVKDILGKHVTVQIARRSELHTFKVIPKRWIVERSF
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
AWLEKNRRLWKNCERKLNTSLQFIHLAFMALILRRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDAQSVKNTDTAGQKGYDAGKKVSGIKRHIAVDTQGLPHAIAVTTAEVTDRKGALQALKR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHH
CKPNLKQIQSLLCDSGYVGQPFAQGVKDILGKHVTVQIARRSELHTFKVIPKRWIVERSF
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
AWLEKNRRLWKNCERKLNTSLQFIHLAFMALILRRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA