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The map label for this gene is yhfA [H]

Identifier: 114331415

GI number: 114331415

Start: 1506285

End: 1506701

Strand: Reverse

Name: yhfA [H]

Synonym: Neut_1426

Alternate gene names: 114331415

Gene position: 1506701-1506285 (Counterclockwise)

Preceding gene: 114331416

Following gene: 114331411

Centisome position: 56.62

GC content: 47.48

Gene sequence:

>417_bases
ATGAAAGTAAAAATTGCATGGCAGGAAGGAGTCAGTTTTCTCGGACAGGTTGGGAGCGGGCATTCTGTACTCATGGATGG
CGCACCGGAAGCAGGCGGGAAAAATCAAGGCCCACGTCCAATGGAAATGATATTGCTTGGCCTGGGAGGGTGTACCTCCT
TTGATGTCGTACATATTTTGCGTAAAGGTCGTCAGGAAATTACCGGATGCCAGGTTGAAGTGGATGCGCAACGTGCAACT
GAAGATCCGAAAGTGTTCACCCATATTCATTTGCATTTCATCATTGCCGGGAGGAACCTGGATTTGCGGCAAGTGGAACG
GTCAATCAGTTTATCTGCCGAAAAATACTGCTCTGCTTCCATGATGCTGAAGGCGACAGTTAACATCACGCACGATTATG
AAGTTATTGCTGGTTAA

Upstream 100 bases:

>100_bases
GCTTTTAAAGCTCGGGATGTATTTTGCTGTTGATGACAATCGTTGTAAGGCAATCGAAAGGAATAGTTTTCTATTTACGA
TCAACTTATCTCTAAAATAA

Downstream 100 bases:

>100_bases
ATAGGCACTTTAAAAATACAGATTAAAACAGGATGGGGATATTGATTTTTCCAAACTTTCAATGAGTTCCAAAACGATCT
CAAAGTCAGTCTACACGCCG

Product: OsmC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKVKIAWQEGVSFLGQVGSGHSVLMDGAPEAGGKNQGPRPMEMILLGLGGCTSFDVVHILRKGRQEITGCQVEVDAQRAT
EDPKVFTHIHLHFIIAGRNLDLRQVERSISLSAEKYCSASMMLKATVNITHDYEVIAG

Sequences:

>Translated_138_residues
MKVKIAWQEGVSFLGQVGSGHSVLMDGAPEAGGKNQGPRPMEMILLGLGGCTSFDVVHILRKGRQEITGCQVEVDAQRAT
EDPKVFTHIHLHFIIAGRNLDLRQVERSISLSAEKYCSASMMLKATVNITHDYEVIAG
>Mature_138_residues
MKVKIAWQEGVSFLGQVGSGHSVLMDGAPEAGGKNQGPRPMEMILLGLGGCTSFDVVHILRKGRQEITGCQVEVDAQRAT
EDPKVFTHIHLHFIIAGRNLDLRQVERSISLSAEKYCSASMMLKATVNITHDYEVIAG

Specific function: Unknown

COG id: COG1765

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789755, Length=138, Percent_Identity=50, Blast_Score=162, Evalue=9e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 15033; Mature: 15033

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKIAWQEGVSFLGQVGSGHSVLMDGAPEAGGKNQGPRPMEMILLGLGGCTSFDVVHIL
CEEEEEHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHEEEEECCCCCHHHHHHHH
RKGRQEITGCQVEVDAQRATEDPKVFTHIHLHFIIAGRNLDLRQVERSISLSAEKYCSAS
HHCHHHHCCCEEEECHHHCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHCCCHHHHCCCE
MMLKATVNITHDYEVIAG
EEEEEEEEECCCEEEECC
>Mature Secondary Structure
MKVKIAWQEGVSFLGQVGSGHSVLMDGAPEAGGKNQGPRPMEMILLGLGGCTSFDVVHIL
CEEEEEHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHEEEEECCCCCHHHHHHHH
RKGRQEITGCQVEVDAQRATEDPKVFTHIHLHFIIAGRNLDLRQVERSISLSAEKYCSAS
HHCHHHHCCCEEEECHHHCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHCCCHHHHCCCE
MMLKATVNITHDYEVIAG
EEEEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]