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The map label for this gene is sufB [C]

Identifier: 114331237

GI number: 114331237

Start: 1297335

End: 1298771

Strand: Reverse

Name: sufB [C]

Synonym: Neut_1241

Alternate gene names: 114331237

Gene position: 1298771-1297335 (Counterclockwise)

Preceding gene: 114331238

Following gene: 114331236

Centisome position: 48.81

GC content: 44.75

Gene sequence:

>1437_bases
ATGAGTGCTGCATTACAAAATTTGGTGAATCAACCATATAAGCACGGCTTCGTTACGAATATAGAATCCGATATTGCGCC
TAAAGGGCTCAATGAGGATATTATCCGGCTGATTTCTTCCAAGAAAAATGAACCTGAATGGCTGCTTACGTTCAGATTGG
AGGCTTATCGGAGGTGGCTCAATATGATTGAGCCCACTTGGCAAAATGTTAAATATCCCAAAATTAATTTTCAGAATATC
AGCTATTATTCGGCGCCCAAGCCAAAGAAAAAGCTTGCCAGCATGGATGAAGTTGATCCTGAGCTGTTGCGTACATTTGA
AAAGCTGGGTATCCCCATGCATGAGCGGGCGGCACTGGCAGGAGTTGCTGTTGACGTTATTTTTGACAGCGTATCGGTTG
CAACAACTTATAAAGAAAAACTGGCTGAGGTTGGTATTATTTTCTGTTCGATTTCGGAGGCCGTTCAGCGGTATCCCGAG
TTAATCAGACAGTACCTGGGTACAGTTGTGCCGCCAGGGGACAACTACTATGCAGCACTGAATTCCGCTGTATTTACGGA
TGGTTCTTTCTGTTTTATTCCGAAGGGGGTTAAATGCCCTATGGATTTATCCACCTACTTCCGTATCAACACGGAAGAAT
CCGGGCAATTTGAACGTACGCTGATTATTGCAGAGGAGGGCGCGTCCGTTTCCTATCTGGAAGGATGTACTGCTCCCCGT
TTTGATACGAATCAACTTCATGCGGCCGTAGTCGAATTGATTGCTCTGGATGATGCGGATATCAAGTATTCAACTGTACA
GAACTGGTATGCCGGGGATGAGAATGGCGTCGGGGGCATTTATAATTTTGTTACCAAGCGTGGACTGGCCAAAGGCAGGA
ATTCACGTATTTCCTGGACACAGGTGGAAACTGGTTCGGCTATTACCTGGAAATATCCTTCATGTATCTTGCGTGGAGAA
AACTCTGTTGGAGAATTCTATTCCGTTGCTGTCACTAATCACCATCAACAGGCTGACACCGGTACCAAAATGATTCATAT
CGGTCCGAATACGCGCAGCACCATCGTGAGTAAAGGAATTTCGGCAGGCCAATCTAACAGCAGCTATCGCGGTTTGGTGA
GAATTACCCCAACAGCACGGAATGCCCGCAACTATTCGCAATGTGATTCGATGTTGATTGGCAGCCAATGCGGGGCTCAT
ACTTTCCCTTATATTCAAGTACAAAATAATAGTGCACAAGTTGAACATGAAGCTTCAACTTCCAAAATTGGAGAAGATCA
GCTGTTTTATTTCGCACAACGTGGCATCGATGCGGAAGAAGCGGTCTCAATGATTATTAATGGTTTTTGTAAAGAGGTTT
TTCAGCAATTACCTTTGGAATTTGCAGTAGAGGCCACTAAATTACTCAGCTTCAAACTGGAAGGGAGTGTCGGATGA

Upstream 100 bases:

>100_bases
CTAAACAGCTCTTTTAAATTTAGCAATCCAAATATAGACAATACTTGTGGCTGTGGAGAGAGCTTCAGCCTTAAAACTTA
GAAATTCAGGAATTATAAAA

Downstream 100 bases:

>100_bases
TAAATGCAAATAGCAAGATTCTGCTTGAAGTCCATGATTTACATGCAACAGTTAGCGGAGCCGAGATTCTCAAAGGAGTG
GATATCACGGTAAGGAGTGG

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MSAALQNLVNQPYKHGFVTNIESDIAPKGLNEDIIRLISSKKNEPEWLLTFRLEAYRRWLNMIEPTWQNVKYPKINFQNI
SYYSAPKPKKKLASMDEVDPELLRTFEKLGIPMHERAALAGVAVDVIFDSVSVATTYKEKLAEVGIIFCSISEAVQRYPE
LIRQYLGTVVPPGDNYYAALNSAVFTDGSFCFIPKGVKCPMDLSTYFRINTEESGQFERTLIIAEEGASVSYLEGCTAPR
FDTNQLHAAVVELIALDDADIKYSTVQNWYAGDENGVGGIYNFVTKRGLAKGRNSRISWTQVETGSAITWKYPSCILRGE
NSVGEFYSVAVTNHHQQADTGTKMIHIGPNTRSTIVSKGISAGQSNSSYRGLVRITPTARNARNYSQCDSMLIGSQCGAH
TFPYIQVQNNSAQVEHEASTSKIGEDQLFYFAQRGIDAEEAVSMIINGFCKEVFQQLPLEFAVEATKLLSFKLEGSVG

Sequences:

>Translated_478_residues
MSAALQNLVNQPYKHGFVTNIESDIAPKGLNEDIIRLISSKKNEPEWLLTFRLEAYRRWLNMIEPTWQNVKYPKINFQNI
SYYSAPKPKKKLASMDEVDPELLRTFEKLGIPMHERAALAGVAVDVIFDSVSVATTYKEKLAEVGIIFCSISEAVQRYPE
LIRQYLGTVVPPGDNYYAALNSAVFTDGSFCFIPKGVKCPMDLSTYFRINTEESGQFERTLIIAEEGASVSYLEGCTAPR
FDTNQLHAAVVELIALDDADIKYSTVQNWYAGDENGVGGIYNFVTKRGLAKGRNSRISWTQVETGSAITWKYPSCILRGE
NSVGEFYSVAVTNHHQQADTGTKMIHIGPNTRSTIVSKGISAGQSNSSYRGLVRITPTARNARNYSQCDSMLIGSQCGAH
TFPYIQVQNNSAQVEHEASTSKIGEDQLFYFAQRGIDAEEAVSMIINGFCKEVFQQLPLEFAVEATKLLSFKLEGSVG
>Mature_477_residues
SAALQNLVNQPYKHGFVTNIESDIAPKGLNEDIIRLISSKKNEPEWLLTFRLEAYRRWLNMIEPTWQNVKYPKINFQNIS
YYSAPKPKKKLASMDEVDPELLRTFEKLGIPMHERAALAGVAVDVIFDSVSVATTYKEKLAEVGIIFCSISEAVQRYPEL
IRQYLGTVVPPGDNYYAALNSAVFTDGSFCFIPKGVKCPMDLSTYFRINTEESGQFERTLIIAEEGASVSYLEGCTAPRF
DTNQLHAAVVELIALDDADIKYSTVQNWYAGDENGVGGIYNFVTKRGLAKGRNSRISWTQVETGSAITWKYPSCILRGEN
SVGEFYSVAVTNHHQQADTGTKMIHIGPNTRSTIVSKGISAGQSNSSYRGLVRITPTARNARNYSQCDSMLIGSQCGAHT
FPYIQVQNNSAQVEHEASTSKIGEDQLFYFAQRGIDAEEAVSMIINGFCKEVFQQLPLEFAVEATKLLSFKLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=63.8830897703549, Blast_Score=652, Evalue=0.0,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=26.1437908496732, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53147; Mature: 53015

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAALQNLVNQPYKHGFVTNIESDIAPKGLNEDIIRLISSKKNEPEWLLTFRLEAYRRWL
CCHHHHHHHCCCHHCCCEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHH
NMIEPTWQNVKYPKINFQNISYYSAPKPKKKLASMDEVDPELLRTFEKLGIPMHERAALA
HHHCCHHHCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHH
GVAVDVIFDSVSVATTYKEKLAEVGIIFCSISEAVQRYPELIRQYLGTVVPPGDNYYAAL
HHHHHHHHCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHEEC
NSAVFTDGSFCFIPKGVKCPMDLSTYFRINTEESGQFERTLIIAEEGASVSYLEGCTAPR
CCEEEECCCEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCEEHHHCCCCCC
FDTNQLHAAVVELIALDDADIKYSTVQNWYAGDENGVGGIYNFVTKRGLAKGRNSRISWT
CCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE
QVETGSAITWKYPSCILRGENSVGEFYSVAVTNHHQQADTGTKMIHIGPNTRSTIVSKGI
EECCCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHCC
SAGQSNSSYRGLVRITPTARNARNYSQCDSMLIGSQCGAHTFPYIQVQNNSAQVEHEAST
CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCHH
SKIGEDQLFYFAQRGIDAEEAVSMIINGFCKEVFQQLPLEFAVEATKLLSFKLEGSVG
HHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure 
SAALQNLVNQPYKHGFVTNIESDIAPKGLNEDIIRLISSKKNEPEWLLTFRLEAYRRWL
CHHHHHHHCCCHHCCCEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHH
NMIEPTWQNVKYPKINFQNISYYSAPKPKKKLASMDEVDPELLRTFEKLGIPMHERAALA
HHHCCHHHCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHH
GVAVDVIFDSVSVATTYKEKLAEVGIIFCSISEAVQRYPELIRQYLGTVVPPGDNYYAAL
HHHHHHHHCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHEEC
NSAVFTDGSFCFIPKGVKCPMDLSTYFRINTEESGQFERTLIIAEEGASVSYLEGCTAPR
CCEEEECCCEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCEEHHHCCCCCC
FDTNQLHAAVVELIALDDADIKYSTVQNWYAGDENGVGGIYNFVTKRGLAKGRNSRISWT
CCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE
QVETGSAITWKYPSCILRGENSVGEFYSVAVTNHHQQADTGTKMIHIGPNTRSTIVSKGI
EECCCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHCC
SAGQSNSSYRGLVRITPTARNARNYSQCDSMLIGSQCGAHTFPYIQVQNNSAQVEHEAST
CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCHH
SKIGEDQLFYFAQRGIDAEEAVSMIINGFCKEVFQQLPLEFAVEATKLLSFKLEGSVG
HHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]