| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477548
Identifier: 113477548
GI number: 113477548
Start: 6370825
End: 6371025
Strand: Reverse
Name: 113477548
Synonym: Tery_4128
Alternate gene names: NA
Gene position: 6371025-6370825 (Counterclockwise)
Preceding gene: 113477549
Following gene: 113477547
Centisome position: 82.21
GC content: 31.84
Gene sequence:
>201_bases ATGAAAGTAATGTTACGCAATAATGAAGCAGGAAAATTAGAAGTTTATGTTGCTAAGAAAGACTTGGAAGAAGAAGTTGT CTCACAAAAAATTGAGGGAGACAATAAAATTTTAACTTTAGGAAATGGTTGGGAATTATCTATCCCTAAAGACCAACCAG AAAAATTACCCACAACAATAGAAGCTAAGAGATTAGACTAA
Upstream 100 bases:
>100_bases TCTTACAAAAATTTTATATTTATTCAGTGCATTTCATCAAAAAAGGAATGGTTATCGGTTGTCGTCAAAATGAAATTGAA CTTGTGGAGGAAAACTACTC
Downstream 100 bases:
>100_bases AATTTTCTTTTTTTCCATGGTTACTCCTTATTTTTTGACCACCAGATGAGATTTATATCTTGTTTTGGTGGTTTTTTTTG TTACAGGACTTACTCATAAC
Product: NifT/FixU
Products: NA
Alternate protein names: NifT/FixU; NifT/FixU Family Protein; NifT Protein
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MKVMLRNNEAGKLEVYVAKKDLEEEVVSQKIEGDNKILTLGNGWELSIPKDQPEKLPTTIEAKRLD
Sequences:
>Translated_66_residues MKVMLRNNEAGKLEVYVAKKDLEEEVVSQKIEGDNKILTLGNGWELSIPKDQPEKLPTTIEAKRLD >Mature_66_residues MKVMLRNNEAGKLEVYVAKKDLEEEVVSQKIEGDNKILTLGNGWELSIPKDQPEKLPTTIEAKRLD
Specific function: Unknown
COG id: COG5554
COG function: function code Q; Nitrogen fixation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7495; Mature: 7495
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVMLRNNEAGKLEVYVAKKDLEEEVVSQKIEGDNKILTLGNGWELSIPKDQPEKLPTTI CEEEEECCCCCEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCEE EAKRLD EEEECC >Mature Secondary Structure MKVMLRNNEAGKLEVYVAKKDLEEEVVSQKIEGDNKILTLGNGWELSIPKDQPEKLPTTI CEEEEECCCCCEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCEE EAKRLD EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA