| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is htpG [H]
Identifier: 113477547
GI number: 113477547
Start: 6366665
End: 6368674
Strand: Reverse
Name: htpG [H]
Synonym: Tery_4127
Alternate gene names: 113477547
Gene position: 6368674-6366665 (Counterclockwise)
Preceding gene: 113477548
Following gene: 113477546
Centisome position: 82.18
GC content: 33.68
Gene sequence:
>2010_bases ATGGCTACAACACTAGAAAAAGGTCAAATCAGTATTCATACTGAAAATATCTTCCCAATTATCAAAAAATCTCTTTATAC CGACCATGAAATTTTCTTAAGAGAATTAGTATCTAATGGTGTAGATGCTATTGCCAAACTAAAAATGGTGGCTAGAACTG GAGAGTATAGTGGTGATGTTACTAACCCAGAAATAGAAATCAAAATAGATAAAGATAATCAAAGTATTTCCATTACCGAT AATGGTATTGGTATGACTACCGATGAGATTAAAAAATACATTAATCAAGTTGCTTTTTCTAGTGCCGAAGAATTTATAGA AAAATATAAAGGTAGTGAGAATGACGCCATTATCGGTCATTTTGGTTTGGGTTTTTACTCCTCTTTTATGGTAGCCAAAA AGGTAGAAATTGACACCCTTTCCTATCAAGAAGGAGCCCAAGCTGTTCATTGGAGTTGTGACGGTTCTCCTGAATTTGAA ATATCAAATTCAACTCGTACAGAACGAGGTACAACTATTACCTTAACCCTCCAAGATGAAGAAAAAGAATATATTGAATC TACTCGCATAAATCAGTTAATTAAGACTTACTGTGATTTTATGCCAGTGCCCATCAAATTTGAGGGTGAAGAAGTTAATA AACATAAAGCAATATGGCGAGAGTCTACTCAGAATGTGACTAAAGATGATTATTTAGAATTATATCGTCATCTTTATCCT TTTCAAGAAGATCCTCTTTTATGGGTTCATCTTAATACTGATTACCCTTTTATTGTTAATGGCATTCTTTATTTTCCTAA ATTAAAGCCAGATGTAGATGTTACTCAAGGCAATATTAAATTGTTCTGTAATCAAGTATTTGTTACTGACCATTGTGAGG AAATTATTCCTAAATTTTTAATGCCATTACGAGGAGTAATTGATAGTACAGATATTCCTTTAAATGTTTCTCGGAGTTCT TTATTAAGCAATAGAACTGTTAGGAGAATTGCAGATTATATAGCTAAAAAAGTAGGCGATCGCCTCAAAGAACTTTATCG TGATGAGCGGGATAAATATATTAGTGGTTGGCAAGATGTTGGTACATTTGTTAAGTTTGGTGCCCTCAATGATGATAAGT TTAAAAAGCAAGTAGAAGATATTGTAATTTTCCGCACTACAGCCCAATTAAATAAAGAGGAAACAACTGAAACTGAAGCT AAACCAGCAGTAGAAGTACAAGCAGAAGGAGAAGATGTTTGGCAAGAAGTAGCTCCAGAAACTTCTGAAGTTAAAAATAC TGACCAACAAGGTTTTTATTACACAACTCTCAAAGAATATTTAGAACGTAATAAAGAACGTCATGAAAACCGGGTTTATT ATTGTACTGAACCAGCATCTCAAGCAACTTATGTAGAGCTACATAAAAACCAAGGGTTAGAAGTTTTATTCCTTGACTCT TTCATAGATACTCACTTTATTAGCTTCCTAGAAAGAGAATATCAAGATGTTAAATTTTCTAGGGTTGATTCAGATTTAGA TGATACTTTAATTGATAAAGAAAATCAATCCGAAATAGTTGACCCAACTACTAATAAAACTCGCAGCGAACAAATTAAAG AGTTATTTGAAAAAGCCCTCAATAAACCAAAAGTAAATGTTAAAGCTCAGGCATTAAAATCAGAAGATGCCAAAACTACT CCTCCAGCAATAGTATTATTACCAGAAGCAATGCGAAGGCTACGGGACATGACAGCTTTATTCCAACAGGAAAAAACAGA ATTTCCCGAAGACCACGTTTTGTTAGTTAATACAGCCCACCCGCTAATTCAGAATCTTGCTAATATTAATCAGGGTAGTA TTATTCAAGGCAGTGGAGAATCTCCATCAGCAGAATTAGCAAAAGAAATTTGTTATCATGTTTATGATTTAGCCCTAATA GCACAGAAAGGTTTTGGTGCTGAGGGGATGAAAGAATTTATCGAACGGTCTAATAAAGTATTGACTAAATTAACAGAACA TGCAGTCTAG
Upstream 100 bases:
>100_bases CTCCTTGAAGGATAATTCCCTTTTGGTATGATGAAAAATTAATAACTAATAGCTAATAGCTGAAGACTTACAATGTTCAA CTAGATAAAATAGATAAACT
Downstream 100 bases:
>100_bases ATTTTACTAAGTCTTTTGGGGCTGAAAATTCTATCTAGCAGTCTAAGCATAGGGCGGGGACAAGCAGTTTACCTTGAGGT ACTTTCGGGAGAAGCTCTAC
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G [H]
Number of amino acids: Translated: 669; Mature: 668
Protein sequence:
>669_residues MATTLEKGQISIHTENIFPIIKKSLYTDHEIFLRELVSNGVDAIAKLKMVARTGEYSGDVTNPEIEIKIDKDNQSISITD NGIGMTTDEIKKYINQVAFSSAEEFIEKYKGSENDAIIGHFGLGFYSSFMVAKKVEIDTLSYQEGAQAVHWSCDGSPEFE ISNSTRTERGTTITLTLQDEEKEYIESTRINQLIKTYCDFMPVPIKFEGEEVNKHKAIWRESTQNVTKDDYLELYRHLYP FQEDPLLWVHLNTDYPFIVNGILYFPKLKPDVDVTQGNIKLFCNQVFVTDHCEEIIPKFLMPLRGVIDSTDIPLNVSRSS LLSNRTVRRIADYIAKKVGDRLKELYRDERDKYISGWQDVGTFVKFGALNDDKFKKQVEDIVIFRTTAQLNKEETTETEA KPAVEVQAEGEDVWQEVAPETSEVKNTDQQGFYYTTLKEYLERNKERHENRVYYCTEPASQATYVELHKNQGLEVLFLDS FIDTHFISFLEREYQDVKFSRVDSDLDDTLIDKENQSEIVDPTTNKTRSEQIKELFEKALNKPKVNVKAQALKSEDAKTT PPAIVLLPEAMRRLRDMTALFQQEKTEFPEDHVLLVNTAHPLIQNLANINQGSIIQGSGESPSAELAKEICYHVYDLALI AQKGFGAEGMKEFIERSNKVLTKLTEHAV
Sequences:
>Translated_669_residues MATTLEKGQISIHTENIFPIIKKSLYTDHEIFLRELVSNGVDAIAKLKMVARTGEYSGDVTNPEIEIKIDKDNQSISITD NGIGMTTDEIKKYINQVAFSSAEEFIEKYKGSENDAIIGHFGLGFYSSFMVAKKVEIDTLSYQEGAQAVHWSCDGSPEFE ISNSTRTERGTTITLTLQDEEKEYIESTRINQLIKTYCDFMPVPIKFEGEEVNKHKAIWRESTQNVTKDDYLELYRHLYP FQEDPLLWVHLNTDYPFIVNGILYFPKLKPDVDVTQGNIKLFCNQVFVTDHCEEIIPKFLMPLRGVIDSTDIPLNVSRSS LLSNRTVRRIADYIAKKVGDRLKELYRDERDKYISGWQDVGTFVKFGALNDDKFKKQVEDIVIFRTTAQLNKEETTETEA KPAVEVQAEGEDVWQEVAPETSEVKNTDQQGFYYTTLKEYLERNKERHENRVYYCTEPASQATYVELHKNQGLEVLFLDS FIDTHFISFLEREYQDVKFSRVDSDLDDTLIDKENQSEIVDPTTNKTRSEQIKELFEKALNKPKVNVKAQALKSEDAKTT PPAIVLLPEAMRRLRDMTALFQQEKTEFPEDHVLLVNTAHPLIQNLANINQGSIIQGSGESPSAELAKEICYHVYDLALI AQKGFGAEGMKEFIERSNKVLTKLTEHAV >Mature_668_residues ATTLEKGQISIHTENIFPIIKKSLYTDHEIFLRELVSNGVDAIAKLKMVARTGEYSGDVTNPEIEIKIDKDNQSISITDN GIGMTTDEIKKYINQVAFSSAEEFIEKYKGSENDAIIGHFGLGFYSSFMVAKKVEIDTLSYQEGAQAVHWSCDGSPEFEI SNSTRTERGTTITLTLQDEEKEYIESTRINQLIKTYCDFMPVPIKFEGEEVNKHKAIWRESTQNVTKDDYLELYRHLYPF QEDPLLWVHLNTDYPFIVNGILYFPKLKPDVDVTQGNIKLFCNQVFVTDHCEEIIPKFLMPLRGVIDSTDIPLNVSRSSL LSNRTVRRIADYIAKKVGDRLKELYRDERDKYISGWQDVGTFVKFGALNDDKFKKQVEDIVIFRTTAQLNKEETTETEAK PAVEVQAEGEDVWQEVAPETSEVKNTDQQGFYYTTLKEYLERNKERHENRVYYCTEPASQATYVELHKNQGLEVLFLDSF IDTHFISFLEREYQDVKFSRVDSDLDDTLIDKENQSEIVDPTTNKTRSEQIKELFEKALNKPKVNVKAQALKSEDAKTTP PAIVLLPEAMRRLRDMTALFQQEKTEFPEDHVLLVNTAHPLIQNLANINQGSIIQGSGESPSAELAKEICYHVYDLALIA QKGFGAEGMKEFIERSNKVLTKLTEHAV
Specific function: Molecular chaperone. Has ATPase activity [H]
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family [H]
Homologues:
Organism=Homo sapiens, GI155722983, Length=682, Percent_Identity=27.8592375366569, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI4507677, Length=681, Percent_Identity=25.9911894273128, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI153792590, Length=191, Percent_Identity=31.9371727748691, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI154146191, Length=290, Percent_Identity=26.2068965517241, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI20149594, Length=191, Percent_Identity=31.413612565445, Blast_Score=106, Evalue=8e-23, Organism=Escherichia coli, GI1786679, Length=681, Percent_Identity=28.928046989721, Blast_Score=255, Evalue=8e-69, Organism=Caenorhabditis elegans, GI115535205, Length=500, Percent_Identity=29.6, Blast_Score=209, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17542208, Length=725, Percent_Identity=26.4827586206897, Blast_Score=208, Evalue=9e-54, Organism=Caenorhabditis elegans, GI115535167, Length=414, Percent_Identity=31.1594202898551, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17559162, Length=544, Percent_Identity=26.1029411764706, Blast_Score=198, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6323840, Length=538, Percent_Identity=26.0223048327138, Blast_Score=182, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6325016, Length=542, Percent_Identity=25.4612546125461, Blast_Score=177, Evalue=4e-45, Organism=Drosophila melanogaster, GI24586016, Length=489, Percent_Identity=31.9018404907975, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI21357739, Length=677, Percent_Identity=27.0310192023634, Blast_Score=206, Evalue=5e-53, Organism=Drosophila melanogaster, GI17647529, Length=296, Percent_Identity=26.6891891891892, Blast_Score=114, Evalue=3e-25,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 [H]
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90 [H]
EC number: NA
Molecular weight: Translated: 76636; Mature: 76505
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTLEKGQISIHTENIFPIIKKSLYTDHEIFLRELVSNGVDAIAKLKMVARTGEYSGDV CCCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC TNPEIEIKIDKDNQSISITDNGIGMTTDEIKKYINQVAFSSAEEFIEKYKGSENDAIIGH CCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE FGLGFYSSFMVAKKVEIDTLSYQEGAQAVHWSCDGSPEFEISNSTRTERGTTITLTLQDE CCHHHHHHHHHHHEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCEEEEEEECC EKEYIESTRINQLIKTYCDFMPVPIKFEGEEVNKHKAIWRESTQNVTKDDYLELYRHLYP HHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC FQEDPLLWVHLNTDYPFIVNGILYFPKLKPDVDVTQGNIKLFCNQVFVTDHCEEIIPKFL CCCCCEEEEEECCCCCCHHHCEEECCCCCCCCCEECCCEEEEEEEEHHHHHHHHHHHHHH MPLRGVIDSTDIPLNVSRSSLLSNRTVRRIADYIAKKVGDRLKELYRDERDKYISGWQDV HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GTFVKFGALNDDKFKKQVEDIVIFRTTAQLNKEETTETEAKPAVEVQAEGEDVWQEVAPE HHHHHCCCCCHHHHHHHHHHEEEEEEHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHCCC TSEVKNTDQQGFYYTTLKEYLERNKERHENRVYYCTEPASQATYVELHKNQGLEVLFLDS HHHHCCCCCCCEEHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCEEEEEHH FIDTHFISFLEREYQDVKFSRVDSDLDDTLIDKENQSEIVDPTTNKTRSEQIKELFEKAL HHHHHHHHHHHHHHHHCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH NKPKVNVKAQALKSEDAKTTPPAIVLLPEAMRRLRDMTALFQQEKTEFPEDHVLLVNTAH CCCCCCEEHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHH PLIQNLANINQGSIIQGSGESPSAELAKEICYHVYDLALIAQKGFGAEGMKEFIERSNKV HHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LTKLTEHAV HHHHHHHCC >Mature Secondary Structure ATTLEKGQISIHTENIFPIIKKSLYTDHEIFLRELVSNGVDAIAKLKMVARTGEYSGDV CCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC TNPEIEIKIDKDNQSISITDNGIGMTTDEIKKYINQVAFSSAEEFIEKYKGSENDAIIGH CCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE FGLGFYSSFMVAKKVEIDTLSYQEGAQAVHWSCDGSPEFEISNSTRTERGTTITLTLQDE CCHHHHHHHHHHHEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCEEEEEEECC EKEYIESTRINQLIKTYCDFMPVPIKFEGEEVNKHKAIWRESTQNVTKDDYLELYRHLYP HHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC FQEDPLLWVHLNTDYPFIVNGILYFPKLKPDVDVTQGNIKLFCNQVFVTDHCEEIIPKFL CCCCCEEEEEECCCCCCHHHCEEECCCCCCCCCEECCCEEEEEEEEHHHHHHHHHHHHHH MPLRGVIDSTDIPLNVSRSSLLSNRTVRRIADYIAKKVGDRLKELYRDERDKYISGWQDV HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GTFVKFGALNDDKFKKQVEDIVIFRTTAQLNKEETTETEAKPAVEVQAEGEDVWQEVAPE HHHHHCCCCCHHHHHHHHHHEEEEEEHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHCCC TSEVKNTDQQGFYYTTLKEYLERNKERHENRVYYCTEPASQATYVELHKNQGLEVLFLDS HHHHCCCCCCCEEHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCEEEEEHH FIDTHFISFLEREYQDVKFSRVDSDLDDTLIDKENQSEIVDPTTNKTRSEQIKELFEKAL HHHHHHHHHHHHHHHHCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH NKPKVNVKAQALKSEDAKTTPPAIVLLPEAMRRLRDMTALFQQEKTEFPEDHVLLVNTAH CCCCCCEEHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHH PLIQNLANINQGSIIQGSGESPSAELAKEICYHVYDLALIAQKGFGAEGMKEFIERSNKV HHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LTKLTEHAV HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11807048 [H]