The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477533

Identifier: 113477533

GI number: 113477533

Start: 6345000

End: 6345869

Strand: Reverse

Name: 113477533

Synonym: Tery_4113

Alternate gene names: NA

Gene position: 6345869-6345000 (Counterclockwise)

Preceding gene: 113477536

Following gene: 113477531

Centisome position: 81.88

GC content: 31.95

Gene sequence:

>870_bases
ATGTTTACCAATAAACAACCAAACCAATATACCCACCTTACAGCTATAGACCGTAAATTTATCTCATTTCCAACTCAAGT
AATACTAAAACAAAACTTGCTAGTAGGTAAAATTCTTGATTTTGGCTGTGGTCTCGGTAAAGACGTTAAACTACTACAAA
AAAAAGGCTTTGATATTATTGGTTACGACCCTTATTATTTTCCAGAATATCCCCAGGGAAAATTTGATACTATCCTTTGT
TTTTATGTCTTAAACGTCTTATTTGAACAACCACAAATCGAAGTGTTGATGCAAATTTCCCAGTTATTAAACTCTGAAGG
AAAAGCTTATTATGCTGTGAGAAGAGGTTTGAAAGGAGAAGGTTTTCGAGAACATTACATACACAAAAAACCAACTTATC
AGTGTTTAGTTAATTTACCTTTTAAATCTATTTATACTGATGAACTTCGTGAAATTTATGAATATACTCATTATAATCAG
CAAAAAAATTCAGAGAACAAATGCTTATTTTGTAATCCTCGTAAAAATCTACAATTAATTACAGAATCAGCAAAAGCTTA
TGCAATACTTGACGGTTACCCAGTCACAAAAGGCCATACATTAATTATTCCCAAACTTCACCAGGAAAATTATTTTGAAT
TGCCTATAAATGACCAGTTAGAATGTTGGTTAATGGTAAATCAAGTACAGAAGATTTTACAGGAAAAATATCAACCTGAC
GGATTTAATATAGGAATTAACGTTAATCATGCTGGAGGACAAAAAATGATGCATACTAATATTCACGTTATTCCTAGATA
TCAAAAGAACGAGTTAGGAACTAAAGGGGGAATGAGGTCTGTTGTTCCAAAGAGGAGAGGCAAAGTATAA

Upstream 100 bases:

>100_bases
AGCCTAGGGGTAAGTTAACTCCTAAAAGCCCCAAACTTAAAAAATCCTGTTAAAAATCCTATTTTACCTAATTTCCCTAC
TCCCTAACCTCTCCATACCA

Downstream 100 bases:

>100_bases
AACCCATTTAGTCTTTTTTGTTAGTCTTTTTTGAGGAAAAAGTATATTTAAGTAGCGATCGCGATTTACTATAATAATTG
ACACAATTTAAGAGCTAAAT

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MFTNKQPNQYTHLTAIDRKFISFPTQVILKQNLLVGKILDFGCGLGKDVKLLQKKGFDIIGYDPYYFPEYPQGKFDTILC
FYVLNVLFEQPQIEVLMQISQLLNSEGKAYYAVRRGLKGEGFREHYIHKKPTYQCLVNLPFKSIYTDELREIYEYTHYNQ
QKNSENKCLFCNPRKNLQLITESAKAYAILDGYPVTKGHTLIIPKLHQENYFELPINDQLECWLMVNQVQKILQEKYQPD
GFNIGINVNHAGGQKMMHTNIHVIPRYQKNELGTKGGMRSVVPKRRGKV

Sequences:

>Translated_289_residues
MFTNKQPNQYTHLTAIDRKFISFPTQVILKQNLLVGKILDFGCGLGKDVKLLQKKGFDIIGYDPYYFPEYPQGKFDTILC
FYVLNVLFEQPQIEVLMQISQLLNSEGKAYYAVRRGLKGEGFREHYIHKKPTYQCLVNLPFKSIYTDELREIYEYTHYNQ
QKNSENKCLFCNPRKNLQLITESAKAYAILDGYPVTKGHTLIIPKLHQENYFELPINDQLECWLMVNQVQKILQEKYQPD
GFNIGINVNHAGGQKMMHTNIHVIPRYQKNELGTKGGMRSVVPKRRGKV
>Mature_289_residues
MFTNKQPNQYTHLTAIDRKFISFPTQVILKQNLLVGKILDFGCGLGKDVKLLQKKGFDIIGYDPYYFPEYPQGKFDTILC
FYVLNVLFEQPQIEVLMQISQLLNSEGKAYYAVRRGLKGEGFREHYIHKKPTYQCLVNLPFKSIYTDELREIYEYTHYNQ
QKNSENKCLFCNPRKNLQLITESAKAYAILDGYPVTKGHTLIIPKLHQENYFELPINDQLECWLMVNQVQKILQEKYQPD
GFNIGINVNHAGGQKMMHTNIHVIPRYQKNELGTKGGMRSVVPKRRGKV

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 33666; Mature: 33666

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTNKQPNQYTHLTAIDRKFISFPTQVILKQNLLVGKILDFGCGLGKDVKLLQKKGFDII
CCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHCCCEEE
GYDPYYFPEYPQGKFDTILCFYVLNVLFEQPQIEVLMQISQLLNSEGKAYYAVRRGLKGE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEHHCCCCCC
GFREHYIHKKPTYQCLVNLPFKSIYTDELREIYEYTHYNQQKNSENKCLFCNPRKNLQLI
CHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEE
TESAKAYAILDGYPVTKGHTLIIPKLHQENYFELPINDQLECWLMVNQVQKILQEKYQPD
ECCCCEEEEECCEECCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
GFNIGINVNHAGGQKMMHTNIHVIPRYQKNELGTKGGMRSVVPKRRGKV
CEEEEEEEECCCCCEEEECCEEEEECCCCCCCCCCCCCHHHCCHHCCCC
>Mature Secondary Structure
MFTNKQPNQYTHLTAIDRKFISFPTQVILKQNLLVGKILDFGCGLGKDVKLLQKKGFDII
CCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHCCCEEE
GYDPYYFPEYPQGKFDTILCFYVLNVLFEQPQIEVLMQISQLLNSEGKAYYAVRRGLKGE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEHHCCCCCC
GFREHYIHKKPTYQCLVNLPFKSIYTDELREIYEYTHYNQQKNSENKCLFCNPRKNLQLI
CHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEE
TESAKAYAILDGYPVTKGHTLIIPKLHQENYFELPINDQLECWLMVNQVQKILQEKYQPD
ECCCCEEEEECCEECCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
GFNIGINVNHAGGQKMMHTNIHVIPRYQKNELGTKGGMRSVVPKRRGKV
CEEEEEEEECCCCCEEEECCEEEEECCCCCCCCCCCCCHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]