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The map label for this gene is cpcS4

Identifier: 113477531

GI number: 113477531

Start: 6342797

End: 6343378

Strand: Reverse

Name: cpcS4

Synonym: Tery_4111

Alternate gene names: 113477531

Gene position: 6343378-6342797 (Counterclockwise)

Preceding gene: 113477533

Following gene: 113477523

Centisome position: 81.85

GC content: 34.02

Gene sequence:

>582_bases
ATGAAGTTAAAACCACCAATGACAATGATGGATTTTTTTCTCAAAAGCGAGGGAACATGGTTTTCTCAACGTACTGTTCA
TCATTTTGATTCTGCTCAAGATGAATCAGGAAAATCTAATATACTTGTCAAAGTTTTAACAAAAGATGACCCCAAAGTTA
TCAAAGTTTGTGAACAGCAAAAAGTCAACCCAGCTTTAGCAAAAGGTGGTGCAAGTTTTAACTGGCAAGATAATTTAGAT
CATGGTGAACCTAACCCAAATTATAGTGCTATTCTAGTTGATATTCCTGATTCTCAAACAGGTAGAACTGGAAAATTTTT
GCGTAATCGTGGTTATATTGAAAGTATTCCTGTAGTGAGTAGATATCATTTTACCAACGATGGAGTCTTAACAATTGACA
CAGAATATGAAAAAAATCAAGGACAAGAACGTTGTTGGTTTTTGACTGATGATTTTCGGGTACGAATTAATACAGTGCGA
ATGATGAATGGTGTTAATTTAATGGCTTATTGTTCTGAACGCCGTTGTATTACTCGCAAACAATTAGAAGAAATTGTTCA
AAAAAATGCTGCTAGAAGTTGA

Upstream 100 bases:

>100_bases
CATTAGATTTATCCTATAATCTTATAACTTTCAACTAGATTTTTGTTAATTTTCTTAACTAAAAATCTGACATTTGTCAA
TAAAACTTTAAGAGTAAAAA

Downstream 100 bases:

>100_bases
GGTTAGTTAACTATTGTTGATTTACTAATGTTTATTCACTTAAGCTGATATAAAACCCTTGTAATCTCAGTATAGGGAAA
TTAATCAAACTTATCTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKLKPPMTMMDFFLKSEGTWFSQRTVHHFDSAQDESGKSNILVKVLTKDDPKVIKVCEQQKVNPALAKGGASFNWQDNLD
HGEPNPNYSAILVDIPDSQTGRTGKFLRNRGYIESIPVVSRYHFTNDGVLTIDTEYEKNQGQERCWFLTDDFRVRINTVR
MMNGVNLMAYCSERRCITRKQLEEIVQKNAARS

Sequences:

>Translated_193_residues
MKLKPPMTMMDFFLKSEGTWFSQRTVHHFDSAQDESGKSNILVKVLTKDDPKVIKVCEQQKVNPALAKGGASFNWQDNLD
HGEPNPNYSAILVDIPDSQTGRTGKFLRNRGYIESIPVVSRYHFTNDGVLTIDTEYEKNQGQERCWFLTDDFRVRINTVR
MMNGVNLMAYCSERRCITRKQLEEIVQKNAARS
>Mature_193_residues
MKLKPPMTMMDFFLKSEGTWFSQRTVHHFDSAQDESGKSNILVKVLTKDDPKVIKVCEQQKVNPALAKGGASFNWQDNLD
HGEPNPNYSAILVDIPDSQTGRTGKFLRNRGYIESIPVVSRYHFTNDGVLTIDTEYEKNQGQERCWFLTDDFRVRINTVR
MMNGVNLMAYCSERRCITRKQLEEIVQKNAARS

Specific function: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CPXS4_TRIEI (Q10XA5)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_723592.1
- ProteinModelPortal:   Q10XA5
- SMR:   Q10XA5
- STRING:   Q10XA5
- GeneID:   4245625
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_4111
- NMPDR:   fig|203124.1.peg.5276
- eggNOG:   NOG40203
- HOGENOM:   HBG442183
- OMA:   RFWWESN
- ProtClustDB:   CLSK826589
- BioCyc:   TERY203124:TERY_4111-MONOMER
- GO:   GO:0005488
- HAMAP:   MF_01459
- InterPro:   IPR012674
- InterPro:   IPR018536
- Gene3D:   G3DSA:2.40.128.20

Pfam domain/function: PF09367 CpeS

EC number: NA

Molecular weight: Translated: 22212; Mature: 22212

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKPPMTMMDFFLKSEGTWFSQRTVHHFDSAQDESGKSNILVKVLTKDDPKVIKVCEQQ
CCCCCCHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHC
KVNPALAKGGASFNWQDNLDHGEPNPNYSAILVDIPDSQTGRTGKFLRNRGYIESIPVVS
CCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEE
RYHFTNDGVLTIDTEYEKNQGQERCWFLTDDFRVRINTVRMMNGVNLMAYCSERRCITRK
EEEECCCCEEEEECCCCCCCCCCEEEEEECCEEEEEEEEEEECCCEEEEEECCCCCCCHH
QLEEIVQKNAARS
HHHHHHHHHCCCC
>Mature Secondary Structure
MKLKPPMTMMDFFLKSEGTWFSQRTVHHFDSAQDESGKSNILVKVLTKDDPKVIKVCEQQ
CCCCCCHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHC
KVNPALAKGGASFNWQDNLDHGEPNPNYSAILVDIPDSQTGRTGKFLRNRGYIESIPVVS
CCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEE
RYHFTNDGVLTIDTEYEKNQGQERCWFLTDDFRVRINTVRMMNGVNLMAYCSERRCITRK
EEEECCCCEEEEECCCCCCCCCCEEEEEECCEEEEEEEEEEECCCEEEEEECCCCCCCHH
QLEEIVQKNAARS
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA