| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is menA [H]
Identifier: 113477494
GI number: 113477494
Start: 6285411
End: 6286307
Strand: Reverse
Name: menA [H]
Synonym: Tery_4071
Alternate gene names: 113477494
Gene position: 6286307-6285411 (Counterclockwise)
Preceding gene: 113477496
Following gene: 113477493
Centisome position: 81.11
GC content: 33.44
Gene sequence:
>897_bases ATGACAGCTCAAACAGTAAATAAGTCTGATAAAAAATTATGGTTGGCTGCCATTAAGCCACCTATGTATAGTGTAGCAAT TATGCCGATATGGATAGGAACAGCAATAGCTATCTGGGAAAAAAATGGGATTGACTGGTCTATTTTTTTAACGTTTATCA CATCAGCAATTTTAATTTTGGGTTGGGAGAATATTAGTAATGATGTCTTTGACTCGGAGACAGGTATTGATAAAAATAAG CACCACTCTTTGGTGAATCTAACAGGGAATAAAAACTTAATGTTTTGGTTAGGTAATTTATGTTTATTTTTAGGTATTTT GGGAGTTGCAACAATTAGCTGGTGGCTGCAAGATTTAACTGTAATTGGATTAATATTACTGTGTTGTTTTTTAGGATATG TTTATCAAGGTCCTCCTTTCAGATTAGGTTATCAAGGTTTAGGAGAAATTATCTGCTTTTTTGCTTTTGGTCCTTTAGCA ATTTCTGCTGCTTACTATAGTCAAACTAAGGCTTGGTCAATTACTAGTTTAACGGCTTCAATAATTATTGGAATTACTAC TACTATTATTCTCTTTTGCTCCCACTTTCATCAGGTAAAAGATGACTTAGCAGCAGGAAAGCGATCGCCTATTGTGAGGA TGGGAACTAAAGCAGGTTCTCAAGTATTAAATTGGTCTTGCGGAATTGTTTTTGTATTAATTTCTATTTGTGTAGGTTTA AAACTATTCCCAGTTTGGGCTTTATTAAGTTTTGCTGGCTTGCCTTTTGCTATTCATTTATGTCGTCACCTTAGTCATTA TCACGACCAACCAGAAAAAATTAGTAACTGTAAATTTATTGCAGTTTATCTACATTTTTTTAGTGGATTATTACTTGGCT TAGGATTTGTTATTTGA
Upstream 100 bases:
>100_bases GTTTGGAGTTAGGGTTGATAATTTTATCATAATCAACTTAACTATAACAATCAATTTAACATGACTATTGTTAAAATAAA GGATTAATTATCAAATTAAT
Downstream 100 bases:
>100_bases CATATTCTCAGAGCTGAATATTTATAAGTATTCAGTTATCAGTTTGAATAAAAACTGTTATTTTTAAGGTTTTAAAGTCT TATAGTTACCCTGACATTTT
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTAQTVNKSDKKLWLAAIKPPMYSVAIMPIWIGTAIAIWEKNGIDWSIFLTFITSAILILGWENISNDVFDSETGIDKNK HHSLVNLTGNKNLMFWLGNLCLFLGILGVATISWWLQDLTVIGLILLCCFLGYVYQGPPFRLGYQGLGEIICFFAFGPLA ISAAYYSQTKAWSITSLTASIIIGITTTIILFCSHFHQVKDDLAAGKRSPIVRMGTKAGSQVLNWSCGIVFVLISICVGL KLFPVWALLSFAGLPFAIHLCRHLSHYHDQPEKISNCKFIAVYLHFFSGLLLGLGFVI
Sequences:
>Translated_298_residues MTAQTVNKSDKKLWLAAIKPPMYSVAIMPIWIGTAIAIWEKNGIDWSIFLTFITSAILILGWENISNDVFDSETGIDKNK HHSLVNLTGNKNLMFWLGNLCLFLGILGVATISWWLQDLTVIGLILLCCFLGYVYQGPPFRLGYQGLGEIICFFAFGPLA ISAAYYSQTKAWSITSLTASIIIGITTTIILFCSHFHQVKDDLAAGKRSPIVRMGTKAGSQVLNWSCGIVFVLISICVGL KLFPVWALLSFAGLPFAIHLCRHLSHYHDQPEKISNCKFIAVYLHFFSGLLLGLGFVI >Mature_297_residues TAQTVNKSDKKLWLAAIKPPMYSVAIMPIWIGTAIAIWEKNGIDWSIFLTFITSAILILGWENISNDVFDSETGIDKNKH HSLVNLTGNKNLMFWLGNLCLFLGILGVATISWWLQDLTVIGLILLCCFLGYVYQGPPFRLGYQGLGEIICFFAFGPLAI SAAYYSQTKAWSITSLTASIIIGITTTIILFCSHFHQVKDDLAAGKRSPIVRMGTKAGSQVLNWSCGIVFVLISICVGLK LFPVWALLSFAGLPFAIHLCRHLSHYHDQPEKISNCKFIAVYLHFFSGLLLGLGFVI
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Escherichia coli, GI1790365, Length=285, Percent_Identity=22.8070175438596, Blast_Score=61, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011937 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 33026; Mature: 32895
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQTVNKSDKKLWLAAIKPPMYSVAIMPIWIGTAIAIWEKNGIDWSIFLTFITSAILIL CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHH GWENISNDVFDSETGIDKNKHHSLVNLTGNKNLMFWLGNLCLFLGILGVATISWWLQDLT CCHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIGLILLCCFLGYVYQGPPFRLGYQGLGEIICFFAFGPLAISAAYYSQTKAWSITSLTAS HHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH IIIGITTTIILFCSHFHQVKDDLAAGKRSPIVRMGTKAGSQVLNWSCGIVFVLISICVGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHH KLFPVWALLSFAGLPFAIHLCRHLSHYHDQPEKISNCKFIAVYLHFFSGLLLGLGFVI HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAQTVNKSDKKLWLAAIKPPMYSVAIMPIWIGTAIAIWEKNGIDWSIFLTFITSAILIL CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHH GWENISNDVFDSETGIDKNKHHSLVNLTGNKNLMFWLGNLCLFLGILGVATISWWLQDLT CCHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIGLILLCCFLGYVYQGPPFRLGYQGLGEIICFFAFGPLAISAAYYSQTKAWSITSLTAS HHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH IIIGITTTIILFCSHFHQVKDDLAAGKRSPIVRMGTKAGSQVLNWSCGIVFVLISICVGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHH KLFPVWALLSFAGLPFAIHLCRHLSHYHDQPEKISNCKFIAVYLHFFSGLLLGLGFVI HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]