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The map label for this gene is msrB [H]

Identifier: 113477493

GI number: 113477493

Start: 6284592

End: 6284990

Strand: Reverse

Name: msrB [H]

Synonym: Tery_4070

Alternate gene names: 113477493

Gene position: 6284990-6284592 (Counterclockwise)

Preceding gene: 113477494

Following gene: 113477492

Centisome position: 81.1

GC content: 34.34

Gene sequence:

>399_bases
ATGGTTAATAAAATTAAAAAAAGTGAAAAAGAGTGGAAAGAACAACTTACCCCAGAACAGTTTAATGTAACTAGAAAAAA
GGGAACTGAAAGACCATTCACAGGGGAATATTACAACAATAAAGAAAAAGGAATATATAAATGTGTTTGTTGTGGTATTG
ACCTATTTAGTTCTGAAGCAAAATATGATTCTGGCACAGGCTGGCCTAGTTATTGGAAACCTATTAATCAAGAAAATATC
AAAGAAGAAACTGACTGGAGTTTATTTATGCGGAGAACAGAAGTTCTTTGCAATAATTGTGATGCTCATCTTGGTCATGT
TTTTCCAGATGGTCCCCCTCCAACAGGATTGCGTTATTGCTTGAATTCTGCTGCGCTAAAGTTTTCTAAAGGTGAATAA

Upstream 100 bases:

>100_bases
CCATAAAGAATATGTTATGATTTGTAAAGTATAAAATATTATAGCACTTAAAAATTAGTGTTGTACTGGAAAATAGTTTG
TCAAAATAAACATTAAAGCC

Downstream 100 bases:

>100_bases
ATAATTAGAAATTATGGTGGGAAATATACCACCATATTTTTTTAGTTCAGGCATTTCAGTTATCATTAACTTCCAGATGC
TGGAGACTATATTTATTTCT

Product: methionine-R-sulfoxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MVNKIKKSEKEWKEQLTPEQFNVTRKKGTERPFTGEYYNNKEKGIYKCVCCGIDLFSSEAKYDSGTGWPSYWKPINQENI
KEETDWSLFMRRTEVLCNNCDAHLGHVFPDGPPPTGLRYCLNSAALKFSKGE

Sequences:

>Translated_132_residues
MVNKIKKSEKEWKEQLTPEQFNVTRKKGTERPFTGEYYNNKEKGIYKCVCCGIDLFSSEAKYDSGTGWPSYWKPINQENI
KEETDWSLFMRRTEVLCNNCDAHLGHVFPDGPPPTGLRYCLNSAALKFSKGE
>Mature_132_residues
MVNKIKKSEKEWKEQLTPEQFNVTRKKGTERPFTGEYYNNKEKGIYKCVCCGIDLFSSEAKYDSGTGWPSYWKPINQENI
KEETDWSLFMRRTEVLCNNCDAHLGHVFPDGPPPTGLRYCLNSAALKFSKGE

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=129, Percent_Identity=54.2635658914729, Blast_Score=154, Evalue=2e-38,
Organism=Homo sapiens, GI301336162, Length=129, Percent_Identity=54.2635658914729, Blast_Score=154, Evalue=2e-38,
Organism=Homo sapiens, GI73089054, Length=129, Percent_Identity=54.2635658914729, Blast_Score=154, Evalue=2e-38,
Organism=Homo sapiens, GI37620216, Length=129, Percent_Identity=54.2635658914729, Blast_Score=154, Evalue=3e-38,
Organism=Homo sapiens, GI117606353, Length=128, Percent_Identity=57.8125, Blast_Score=152, Evalue=9e-38,
Organism=Homo sapiens, GI7706511, Length=101, Percent_Identity=36.6336633663366, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1788077, Length=127, Percent_Identity=55.1181102362205, Blast_Score=155, Evalue=8e-40,
Organism=Caenorhabditis elegans, GI17553450, Length=124, Percent_Identity=50, Blast_Score=124, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI115532676, Length=124, Percent_Identity=50, Blast_Score=124, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6319816, Length=139, Percent_Identity=40.2877697841727, Blast_Score=102, Evalue=2e-23,
Organism=Drosophila melanogaster, GI221378664, Length=128, Percent_Identity=50, Blast_Score=140, Evalue=2e-34,
Organism=Drosophila melanogaster, GI24645799, Length=130, Percent_Identity=49.2307692307692, Blast_Score=139, Evalue=3e-34,
Organism=Drosophila melanogaster, GI221378662, Length=136, Percent_Identity=47.7941176470588, Blast_Score=139, Evalue=4e-34,
Organism=Drosophila melanogaster, GI45553335, Length=130, Percent_Identity=49.2307692307692, Blast_Score=139, Evalue=5e-34,
Organism=Drosophila melanogaster, GI21356369, Length=130, Percent_Identity=49.2307692307692, Blast_Score=139, Evalue=5e-34,
Organism=Drosophila melanogaster, GI24645801, Length=141, Percent_Identity=45.3900709219858, Blast_Score=133, Evalue=4e-32,
Organism=Drosophila melanogaster, GI24645804, Length=141, Percent_Identity=45.3900709219858, Blast_Score=132, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 15253; Mature: 15253

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKIKKSEKEWKEQLTPEQFNVTRKKGTERPFTGEYYNNKEKGIYKCVCCGIDLFSSEA
CCCCHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCEEHHHHCCHHHCCCC
KYDSGTGWPSYWKPINQENIKEETDWSLFMRRTEVLCNNCDAHLGHVFPDGPPPTGLRYC
CCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
LNSAALKFSKGE
HHHHHHCCCCCC
>Mature Secondary Structure
MVNKIKKSEKEWKEQLTPEQFNVTRKKGTERPFTGEYYNNKEKGIYKCVCCGIDLFSSEA
CCCCHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCEEHHHHCCHHHCCCC
KYDSGTGWPSYWKPINQENIKEETDWSLFMRRTEVLCNNCDAHLGHVFPDGPPPTGLRYC
CCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
LNSAALKFSKGE
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA