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The map label for this gene is rimP [H]

Identifier: 113477416

GI number: 113477416

Start: 6154179

End: 6154697

Strand: Reverse

Name: rimP [H]

Synonym: Tery_3979

Alternate gene names: 113477416

Gene position: 6154697-6154179 (Counterclockwise)

Preceding gene: 113477417

Following gene: 113477415

Centisome position: 79.41

GC content: 36.99

Gene sequence:

>519_bases
GTGTTAACAATTGTCAATGGGGAGTGGGTAAAGCCCACTTTTTTTATTGCATTTGTCATGAGTCATCCATTAGTACCACA
AATCATTAAATTTGCTACTCCTATTGCTAAATCTCTAGGATTAGAATTAGTAGGAGCAGTATTTCATACAAACCAGCATC
CACCAATTCTCAGATTGGACATTAGACACCCTCATCAAGACACAGGTTTAGATGACTGTGAACGAATGAGTAATGCCATA
GGAGAACAACTAGATGCAGCAAATATAATTCCTGAACCATATCTGTTAGAAATATCTAGTCCTGGTATTTCTAAGTTTTT
GGATAATGACCGAGATTTCATTGCCTTTAAAGGCTTTAATGTAGCTGTGAATACAAGCGAACCCTATAAAGGTAAAAATT
ACTGGATAGGACAACTGGTTAGTCGCGATCAAACAGCTGTTTACATTAACCAAAAAGGTCGACAAGCAAGTATTCCACGT
TCTCTCATTAATACCGTTGAACTACAAGAAGGAAGGTAA

Upstream 100 bases:

>100_bases
GAATTAGAAACTTAACTTAATTATCAAATTTTTTCAATTTTACAAAGCAAAAATGTCAACATAAAACCAAAAAGATATAC
AATATTAGAGGTTAATTAAA

Downstream 100 bases:

>100_bases
AAATAAAAAAAAACGGCTATTTCAGTTATCAGTTATCAGTTATCAGTTATCGGTACTGAGCTAGCCCTCCATAAGCCTGA
AATAATAAAGTTAATTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MLTIVNGEWVKPTFFIAFVMSHPLVPQIIKFATPIAKSLGLELVGAVFHTNQHPPILRLDIRHPHQDTGLDDCERMSNAI
GEQLDAANIIPEPYLLEISSPGISKFLDNDRDFIAFKGFNVAVNTSEPYKGKNYWIGQLVSRDQTAVYINQKGRQASIPR
SLINTVELQEGR

Sequences:

>Translated_172_residues
MLTIVNGEWVKPTFFIAFVMSHPLVPQIIKFATPIAKSLGLELVGAVFHTNQHPPILRLDIRHPHQDTGLDDCERMSNAI
GEQLDAANIIPEPYLLEISSPGISKFLDNDRDFIAFKGFNVAVNTSEPYKGKNYWIGQLVSRDQTAVYINQKGRQASIPR
SLINTVELQEGR
>Mature_172_residues
MLTIVNGEWVKPTFFIAFVMSHPLVPQIIKFATPIAKSLGLELVGAVFHTNQHPPILRLDIRHPHQDTGLDDCERMSNAI
GEQLDAANIIPEPYLLEISSPGISKFLDNDRDFIAFKGFNVAVNTSEPYKGKNYWIGQLVSRDQTAVYINQKGRQASIPR
SLINTVELQEGR

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 19283; Mature: 19283

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTIVNGEWVKPTFFIAFVMSHPLVPQIIKFATPIAKSLGLELVGAVFHTNQHPPILRLD
CEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
IRHPHQDTGLDDCERMSNAIGEQLDAANIIPEPYLLEISSPGISKFLDNDRDFIAFKGFN
ECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCEEEEECCE
VAVNTSEPYKGKNYWIGQLVSRDQTAVYINQKGRQASIPRSLINTVELQEGR
EEEECCCCCCCCCEEEHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MLTIVNGEWVKPTFFIAFVMSHPLVPQIIKFATPIAKSLGLELVGAVFHTNQHPPILRLD
CEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
IRHPHQDTGLDDCERMSNAIGEQLDAANIIPEPYLLEISSPGISKFLDNDRDFIAFKGFN
ECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCEEEEECCE
VAVNTSEPYKGKNYWIGQLVSRDQTAVYINQKGRQASIPRSLINTVELQEGR
EEEECCCCCCCCCEEEHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA