| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477387
Identifier: 113477387
GI number: 113477387
Start: 6104408
End: 6104557
Strand: Reverse
Name: 113477387
Synonym: Tery_3947
Alternate gene names: NA
Gene position: 6104557-6104408 (Counterclockwise)
Preceding gene: 113477389
Following gene: 113477379
Centisome position: 78.77
GC content: 30.67
Gene sequence:
>150_bases GTGATAGGAATAGCTTCGATATATAGATGTTTATTTAGGCCAAAATTGTCAGCAACTAAGGTAAAAAGTTGTCAAATAAA ATTAGATTGGAAAGAATTAGAAAAAGTTGTAACAGCAAATCTAGAGTTGCTTATTGTCAGACAGAGCTAA
Upstream 100 bases:
>100_bases GAAAATATTTTGAACTATGCCTGACAGTTTAGGCTTCAGATAAAAAGTAATAAATTTTGTAGAAAATGGCGGTACAATTA CTAAAGCAGCTCATACATTT
Downstream 100 bases:
>100_bases AAAATTTGGAGTTAATCAACCAGCTATATTTTATGCTTTAAAAAAAATGAATTTTCCTTGAAAAAATCAACAACTTTGTT ATAGAGAAAGAAATATAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 49
Protein sequence:
>49_residues MIGIASIYRCLFRPKLSATKVKSCQIKLDWKELEKVVTANLELLIVRQS
Sequences:
>Translated_49_residues MIGIASIYRCLFRPKLSATKVKSCQIKLDWKELEKVVTANLELLIVRQS >Mature_49_residues MIGIASIYRCLFRPKLSATKVKSCQIKLDWKELEKVVTANLELLIVRQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5635; Mature: 5635
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGIASIYRCLFRPKLSATKVKSCQIKLDWKELEKVVTANLELLIVRQS CCCHHHHHHHHCCCCCCCCCEEEEEEEECHHHHHHHHHCCEEEEEEECC >Mature Secondary Structure MIGIASIYRCLFRPKLSATKVKSCQIKLDWKELEKVVTANLELLIVRQS CCCHHHHHHHHCCCCCCCCCEEEEEEEECHHHHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA