| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477389
Identifier: 113477389
GI number: 113477389
Start: 6106686
End: 6106904
Strand: Reverse
Name: 113477389
Synonym: Tery_3949
Alternate gene names: NA
Gene position: 6106904-6106686 (Counterclockwise)
Preceding gene: 113477390
Following gene: 113477387
Centisome position: 78.8
GC content: 30.59
Gene sequence:
>219_bases ATGACATTTAATAATGATCTTAATGACGTTAATGTTAAGCCGGAAACTCGTAACCACAAAGGATTTTTTATTCAGGAAGG TGATTATAAACTAATGAGTATAGATGAATCTGGTTGGGCTTTAATCTGTCTAGATGATGCAGTATGTCATTATGTAGATC CAGATAACTTAAAAGAAACAAAAGAATTAATGGAAGAATCAGCAACCCTTTATAAATAA
Upstream 100 bases:
>100_bases TAGATTACCACCGAAGACGAAGTAATATCAAGTATCGAAATGATATAAGCTTGAAGACACTAAAACCGTTTTTTGAATAA TGCTAAGGAGTTGAAATACC
Downstream 100 bases:
>100_bases AGGAATAAAGGTTTTTGAAACTATCTTGAGATTAAAAAATGATTTGGGCAAGCTGCCTTGCAAATTAAATAATGGCAGCT TGTTTTTTTTGACAAAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MTFNNDLNDVNVKPETRNHKGFFIQEGDYKLMSIDESGWALICLDDAVCHYVDPDNLKETKELMEESATLYK
Sequences:
>Translated_72_residues MTFNNDLNDVNVKPETRNHKGFFIQEGDYKLMSIDESGWALICLDDAVCHYVDPDNLKETKELMEESATLYK >Mature_71_residues TFNNDLNDVNVKPETRNHKGFFIQEGDYKLMSIDESGWALICLDDAVCHYVDPDNLKETKELMEESATLYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8344; Mature: 8213
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFNNDLNDVNVKPETRNHKGFFIQEGDYKLMSIDESGWALICLDDAVCHYVDPDNLKET CCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEEEEECCCEEECCCCCCHHHH KELMEESATLYK HHHHHHHCCCCC >Mature Secondary Structure TFNNDLNDVNVKPETRNHKGFFIQEGDYKLMSIDESGWALICLDDAVCHYVDPDNLKET CCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEEEEECCCEEECCCCCCHHHH KELMEESATLYK HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA