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The map label for this gene is psbO [H]

Identifier: 113477361

GI number: 113477361

Start: 6052171

End: 6053007

Strand: Reverse

Name: psbO [H]

Synonym: Tery_3917

Alternate gene names: 113477361

Gene position: 6053007-6052171 (Counterclockwise)

Preceding gene: 113477363

Following gene: 113477360

Centisome position: 78.1

GC content: 37.99

Gene sequence:

>837_bases
ATGAAGTATCGCACTTTAATTGCTCTACTATTAGCTGTGTGTTTGAGTGTTTTAACTGCCTGTTCAGAAACCCCTGATAG
CAATAAACCACTTACTTATGAAGACATTGTAAATACTGGCTTGGCCAACAACTGTCCAGAATTACCAGAAACTGCTCGTG
GTTTTATTGCCATTGACCAAAGTCAATCTTATACCTTAACAGATTTGTGTTTGAAGCCAACGACCTATTTCGTTAAGGAA
GAACCAACTAATAAACGCCAAAAAGCAGAGTTTATTCAAGGAAAAAAATTAACTCGTTACACTTCTACCTTAGATCAAAT
AACAGGTGAACTCGTTTTTAATGAAGATAATTCTTTGACATTTAACGAACAATATGGTATTGATTTTCAACCTATAACTA
TTCTTTTACCAGGTGGAGAAGAAGTACCGTTTCTATTTACTGTCAAAGGACTTAGTGCTAAGAGCCAGCCTAATATTACT
GCTATCAATACTTCTACTGATTTTCAGGGACTATACAATGTTCCTTCCTACCGAGGCTCTAGTTTCTTAGACCCTAAAGG
TCGTGGTGTCACTTCAGGATATGATAATGCAGTAGCTTTGCCAGCTAGTTCAGATTCTCAAGGGCTTGTTAAAGCCAATG
TTAAGTCGGCAGAGACTCTTCTCAAAGCTGGTGAAATGTCCCTTCAAATTACTAAAGTAGACGGCGAAACAGGTGAAGTT
GTTGGTATATTTGAGGCCATTCAGCCTTCTGATACAGATTTAGGAGCAAAAGAAGCTCTAGAAGTTAAAGTTCGTGGTAA
TTTTTACGGTCGGGTAGACACCGACACAATTTCTTAG

Upstream 100 bases:

>100_bases
TCCCATAAAATCTAAAATCTAAAACAAATCATTGATACTGCATCAACTATAGAACGCAGTAGCAATGTCAAATATTGAAT
ATTGAATTTTGAGGTTAACA

Downstream 100 bases:

>100_bases
CAACTATTTGTTAAAGGAATATTAAATTTTTGGTGTAGGGTGGGTAGTCTGGCAATATTATATATTCTCGATCCCCAACT
ATTAACTTTCTGCCCTAGCC

Product: photosystem II manganese-stabilizing protein PsbO

Products: NA

Alternate protein names: MSP [H]

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKYRTLIALLLAVCLSVLTACSETPDSNKPLTYEDIVNTGLANNCPELPETARGFIAIDQSQSYTLTDLCLKPTTYFVKE
EPTNKRQKAEFIQGKKLTRYTSTLDQITGELVFNEDNSLTFNEQYGIDFQPITILLPGGEEVPFLFTVKGLSAKSQPNIT
AINTSTDFQGLYNVPSYRGSSFLDPKGRGVTSGYDNAVALPASSDSQGLVKANVKSAETLLKAGEMSLQITKVDGETGEV
VGIFEAIQPSDTDLGAKEALEVKVRGNFYGRVDTDTIS

Sequences:

>Translated_278_residues
MKYRTLIALLLAVCLSVLTACSETPDSNKPLTYEDIVNTGLANNCPELPETARGFIAIDQSQSYTLTDLCLKPTTYFVKE
EPTNKRQKAEFIQGKKLTRYTSTLDQITGELVFNEDNSLTFNEQYGIDFQPITILLPGGEEVPFLFTVKGLSAKSQPNIT
AINTSTDFQGLYNVPSYRGSSFLDPKGRGVTSGYDNAVALPASSDSQGLVKANVKSAETLLKAGEMSLQITKVDGETGEV
VGIFEAIQPSDTDLGAKEALEVKVRGNFYGRVDTDTIS
>Mature_278_residues
MKYRTLIALLLAVCLSVLTACSETPDSNKPLTYEDIVNTGLANNCPELPETARGFIAIDQSQSYTLTDLCLKPTTYFVKE
EPTNKRQKAEFIQGKKLTRYTSTLDQITGELVFNEDNSLTFNEQYGIDFQPITILLPGGEEVPFLFTVKGLSAKSQPNIT
AINTSTDFQGLYNVPSYRGSSFLDPKGRGVTSGYDNAVALPASSDSQGLVKANVKSAETLLKAGEMSLQITKVDGETGEV
VGIFEAIQPSDTDLGAKEALEVKVRGNFYGRVDTDTIS

Specific function: MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002628 [H]

Pfam domain/function: PF01716 MSP [H]

EC number: NA

Molecular weight: Translated: 30209; Mature: 30209

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRTLIALLLAVCLSVLTACSETPDSNKPLTYEDIVNTGLANNCPELPETARGFIAIDQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHCCCCCCCCCCCHHCCCEEEEEC
SQSYTLTDLCLKPTTYFVKEEPTNKRQKAEFIQGKKLTRYTSTLDQITGELVFNEDNSLT
CCCEEEEHEEECCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCEE
FNEQYGIDFQPITILLPGGEEVPFLFTVKGLSAKSQPNITAINTSTDFQGLYNVPSYRGS
ECCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEECCCCCCCC
SFLDPKGRGVTSGYDNAVALPASSDSQGLVKANVKSAETLLKAGEMSLQITKVDGETGEV
CCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHCCCCEEEEEEECCCCCCE
VGIFEAIQPSDTDLGAKEALEVKVRGNFYGRVDTDTIS
EEEEECCCCCCCCCCCCEEEEEEEECCEEEEECCCCCC
>Mature Secondary Structure
MKYRTLIALLLAVCLSVLTACSETPDSNKPLTYEDIVNTGLANNCPELPETARGFIAIDQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHCCCCCCCCCCCHHCCCEEEEEC
SQSYTLTDLCLKPTTYFVKEEPTNKRQKAEFIQGKKLTRYTSTLDQITGELVFNEDNSLT
CCCEEEEHEEECCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCEE
FNEQYGIDFQPITILLPGGEEVPFLFTVKGLSAKSQPNITAINTSTDFQGLYNVPSYRGS
ECCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEECCCCCCCC
SFLDPKGRGVTSGYDNAVALPASSDSQGLVKANVKSAETLLKAGEMSLQITKVDGETGEV
CCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHCCCCEEEEEEECCCCCCE
VGIFEAIQPSDTDLGAKEALEVKVRGNFYGRVDTDTIS
EEEEECCCCCCCCCCCCEEEEEEEECCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2518833; 11759840 [H]