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The map label for this gene is ccmK [H]

Identifier: 113477305

GI number: 113477305

Start: 5949949

End: 5950287

Strand: Reverse

Name: ccmK [H]

Synonym: Tery_3851

Alternate gene names: 113477305

Gene position: 5950287-5949949 (Counterclockwise)

Preceding gene: 113477306

Following gene: 113477304

Centisome position: 76.78

GC content: 44.54

Gene sequence:

>339_bases
ATGTCAATTGCGGTGGGAATGGTAGAAACCCTAGGCTTTCCAGCAGTTGTAGAAGCGGCAGATGCAATGGTGAAAGCGGC
ACGGGTAACTCTTGTTGGCTATGAAAAAATTGGTAGTGGTCGTGTAACCGTAATTATTCGTGGAGATGTATCAGAAGTAC
AAGCTTCAGTAGCAGCAGGAGTTGATAACGTTAGACGGGTGAATGGAGGCCAAGTTATGTCAACTCATATCATTGCCCGT
CCTCATGAAAACCTAGAATATGTTCTGCCTATTCGTTATACTGAGGAGGTTTCTCAGTTCCGCGACAGTACTACTGCAGT
TCGTTCAGTAAACAGATAA

Upstream 100 bases:

>100_bases
GGCTAAGAAGGAACTTTCGCTTATTTGGGCTGAAGAGAATGTGAATTAGCACTATTAGAAACCAAATAAGCCTGTAAAAA
AATATCATGGAGTAAAGATA

Downstream 100 bases:

>100_bases
TAGAAGTAATTTGATTTCGGATGACAGATTTGAGATAGAACTGAAAAAGAGACTCTAAAACATAGCTGAAGTCATAACTC
ATAACTCAGAAATTAAATTC

Product: microcompartments protein

Products: NA

Alternate protein names: Carboxysome shell protein CsoS1 [H]

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIIRGDVSEVQASVAAGVDNVRRVNGGQVMSTHIIAR
PHENLEYVLPIRYTEEVSQFRDSTTAVRSVNR

Sequences:

>Translated_112_residues
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIIRGDVSEVQASVAAGVDNVRRVNGGQVMSTHIIAR
PHENLEYVLPIRYTEEVSQFRDSTTAVRSVNR
>Mature_111_residues
SIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIIRGDVSEVQASVAAGVDNVRRVNGGQVMSTHIIARP
HENLEYVLPIRYTEEVSQFRDSTTAVRSVNR

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=97, Percent_Identity=47.4226804123711, Blast_Score=86, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 12043; Mature: 11912

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIIRGDVSEVQASVAAG
CCEECCHHHHCCCCHHHHHHHHHHHHHHEEEEEHEECCCCEEEEEEECCHHHHHHHHHHC
VDNVRRVNGGQVMSTHIIARPHENLEYVLPIRYTEEVSQFRDSTTAVRSVNR
CHHHEECCCCEEEEEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIIRGDVSEVQASVAAG
CEECCHHHHCCCCHHHHHHHHHHHHHHEEEEEHEECCCCEEEEEEECCHHHHHHHHHHC
VDNVRRVNGGQVMSTHIIARPHENLEYVLPIRYTEEVSQFRDSTTAVRSVNR
CHHHEECCCCEEEEEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA