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The map label for this gene is ccmL [H]

Identifier: 113477304

GI number: 113477304

Start: 5949119

End: 5949421

Strand: Reverse

Name: ccmL [H]

Synonym: Tery_3850

Alternate gene names: 113477304

Gene position: 5949421-5949119 (Counterclockwise)

Preceding gene: 113477305

Following gene: 113477303

Centisome position: 76.77

GC content: 42.24

Gene sequence:

>303_bases
ATGCAAATTGCCAAAGTTCGTGGTACCGTTGTCAGCACTCAGAAAGAGCCTAACTTAAAAGGAACAAAATTACTTCTGCT
GCAATTCATAGATGAAGAAGGCCATCTACTACCAAAGTATGAAGTAGCAGCCGATAATGTCGGTGCCGGAATCAATGAAT
GGGTTTTGGTTAGCCGTGGTGGAGCAGCTCGTGAAATACCAGGGAGTGAAAAACTTCCTGTAGATGCTAGAGTAGTAGCT
ATTATTGACACGATAACTGTGGACAATCGCATGATCTACGGTAAAAAAGACGAATATCGTTGA

Upstream 100 bases:

>100_bases
ACACAATAAATCTACAAACATTAATATTGGTAAACCTAAAAACTTTGTTCAGGTAAAAATCTAAAATCTAAAATCTAAAA
TCATGTAATTCAAATAGATC

Downstream 100 bases:

>100_bases
ATATTCTACTACTAAGCTGTTGAACTGTTGGATGCTGAACTATTTAATTTCAACCTCACTGTTGAGGGTGAGGCCTGATA
ATAATAAATTTACTAAATAC

Product: ethanolamine utilization protein EutN/carboxysome structural protein Ccml

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MQIAKVRGTVVSTQKEPNLKGTKLLLLQFIDEEGHLLPKYEVAADNVGAGINEWVLVSRGGAAREIPGSEKLPVDARVVA
IIDTITVDNRMIYGKKDEYR

Sequences:

>Translated_100_residues
MQIAKVRGTVVSTQKEPNLKGTKLLLLQFIDEEGHLLPKYEVAADNVGAGINEWVLVSRGGAAREIPGSEKLPVDARVVA
IIDTITVDNRMIYGKKDEYR
>Mature_100_residues
MQIAKVRGTVVSTQKEPNLKGTKLLLLQFIDEEGHLLPKYEVAADNVGAGINEWVLVSRGGAAREIPGSEKLPVDARVVA
IIDTITVDNRMIYGKKDEYR

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4576

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli and S.typhimurium CchB [H]

Homologues:

Organism=Escherichia coli, GI1788798, Length=95, Percent_Identity=38.9473684210526, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004992
- ProDom:   PD012510 [H]

Pfam domain/function: PF03319 EutN_CcmL [H]

EC number: NA

Molecular weight: Translated: 11019; Mature: 11019

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIAKVRGTVVSTQKEPNLKGTKLLLLQFIDEEGHLLPKYEVAADNVGAGINEWVLVSRG
CCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEECC
GAAREIPGSEKLPVDARVVAIIDTITVDNRMIYGKKDEYR
CCCCCCCCCCCCCCCEEEEEEEEEEEECCEEEECCCCCCC
>Mature Secondary Structure
MQIAKVRGTVVSTQKEPNLKGTKLLLLQFIDEEGHLLPKYEVAADNVGAGINEWVLVSRG
CCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEECC
GAAREIPGSEKLPVDARVVAIIDTITVDNRMIYGKKDEYR
CCCCCCCCCCCCCCCEEEEEEEEEEEECCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491708 [H]