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The map label for this gene is ccmM [H]

Identifier: 113477303

GI number: 113477303

Start: 5946968

End: 5948986

Strand: Reverse

Name: ccmM [H]

Synonym: Tery_3849

Alternate gene names: 113477303

Gene position: 5948986-5946968 (Counterclockwise)

Preceding gene: 113477304

Following gene: 113477302

Centisome position: 76.76

GC content: 39.33

Gene sequence:

>2019_bases
ATGCCACACCGCAAACAACCAGCTCCACCCACCCCCTGGTCAAAAAACTTGGCACAGCCGAAGATTGATGACACAGCTTA
TATTCACTCCTTTTCCAATATCATTGGAGATGTCCGTGTTGGAGCTAATGTATTAGTAGCTCCGGGCACATCAATTCGTG
CAGATGAAGGTACTCCCTTCTTTATTGGAGCAGGAACTAATATCCAAGATGGAGTAGTTATACATGGTTTAGAACAAGGA
CGAGTTATAGGAGATGACCAACAAAACTATTCTGTATGGATAGGTACAAATGTTTCTATCACTCATAAAGCTTTAGTTCA
TGGTCCTTGCTATATCGGTGATGACTGTTTTATCGGCTTTCGTTCTACAGTTTTTAACTCCCGCATTGGTGAAGGATGTA
TAGTTATGCTTCACGCTCTGATCCAGGACGTGGAAATTCCTCCCGGTAAGTATGTGCCTTCAGGAGCAATTATTACAAAT
CAACAGCAAGTAAATCGTTTGTCAGATGTACTACCCGATGATATAAAATTTGCCCATCATGTAGTGGGAATTAACGAATC
TTTACGACAAGGTTATCTGTGTGCGAATAATATATCTTGCATTACCCCTATTAGAAATGAAATGAATATTAATTATAAAA
ATGGTAACGGTTACAACCCTTCAGGAACAACTGGTAGACTAACCCCAGAAGTAGTTGCTCATGTAAACCAGTTAGTATCC
CAAGGATATTATGTTGGTACAGAACACGCTGACACCCGTCACTTCAAAACAGGTTCCTGGAAAACTTGTTCTCCAATTCA
AAGTAGTCACTCTTCAGAAGTAGTAGCAGCTCTAGAAGCTTGTATACAAGAACATTCTACAGAGTATGTGCGGATGTTTG
GTATAGACCCTAAAGCTAAACGTCGTATATCTCCAATTATGATTCAACGTCCTGATGGTAAAAAAGTTGCTCAAAAATCA
ACGACTGGTAACTACAGTGTTCCTGCTGCTACTGGTACTACTAGGGTTGGAAGTACTACTACCCCCAATACTACAGGTCT
AACTCCAGAAGTAGTAACCCAAGTTAATTCTTTGCTGTCTCAAGGATACAAGATTGGTACGGAGTATGCCAATGAACGTC
GTTTTAAAACTAGCTCTTGGCAAAACGGTCCGACTATTTCTGAGACTAATTCTGCACAAGTTTTGGCTGCTCTAGAAAAA
TTTTTAGCAGAACACAGTGGTGAATATGTACGTTTAATTGGTATAGACTCTAAAGTTAAACGTCGTGTTGCAGAAATAAT
AATTCAACGACCAGGCGATAGCCCAATTCAACAATGTGTATCTACTTCTCCAAGTTATCAAGCTCCTGTATCTACTCATG
CAGGAATTAATACTCGATTAAGTCAGGAAGTTGTAGAGCAAGTACGTTCATTATTTAATCAAGGATATAGAATTAGCTTA
GAACACGCTAATGAACGTCGCTTTAAAACTAGCTCCTGGATAAGTTGCGCTCCCATTTCTGCTACTAACCATTCTCAAGC
AATAGCTGAATTAGAACAAGTTTTAGCAGAATATAATGGGGAATATGTACGTTTAATTGGTATCGATACTCAAGCTAAAC
GTCGGGTCATGGAAAGTTTGATTCAACAACCCAATGGTAAAGGTGAAAGATCTGCTTCTCTTAAGGCTACTTCTAATGGA
GTAGTCAATACTACTCAACAATCTCCTGTTTCTAGTAGTCAAGTGGCTACAACAATAGCCCATAAATTAAGTCAAGAGGC
TGTGGAAGAAATTCGTTCTTTGATTGCAGGTGGTTATAAAATTGGTACAGAATATGCTGATAAACGTCGTTTTAAAACTA
GCTCTTGGAAAACAGATATTCAAATAGATGGTAAACGAGAGGCTGATGTTTTTCCAGTGCTTGAAGAAAGTCTGGCTCAC
CATGAGGGAGAATATGTCCGCTTGATAGGTATAGATCCAAAAGCGAAACGCCGAGTCTTAGAAAAGATTATTCAACAACC
TAACGGTAAGGCTAACTGA

Upstream 100 bases:

>100_bases
TGCTGAACTATTTAATTTCAACCTCACTGTTGAGGGTGAGGCCTGATAATAATAAATTTACTAAATACCCAACATTTAAC
TGAGAAGGAAAAAATAAAGT

Downstream 100 bases:

>100_bases
AGTAGCTGTGAGGTTGTAGGTTCTAGCTAGGGCGTCGATAAGCCTCACCCTATAATTTATGAGAAGTGTATGAGATAAAT
CTATGGTAAATTAATGGGCA

Product: carbonate dehydratase

Products: cofactor [C]

Alternate protein names: NA

Number of amino acids: Translated: 672; Mature: 671

Protein sequence:

>672_residues
MPHRKQPAPPTPWSKNLAQPKIDDTAYIHSFSNIIGDVRVGANVLVAPGTSIRADEGTPFFIGAGTNIQDGVVIHGLEQG
RVIGDDQQNYSVWIGTNVSITHKALVHGPCYIGDDCFIGFRSTVFNSRIGEGCIVMLHALIQDVEIPPGKYVPSGAIITN
QQQVNRLSDVLPDDIKFAHHVVGINESLRQGYLCANNISCITPIRNEMNINYKNGNGYNPSGTTGRLTPEVVAHVNQLVS
QGYYVGTEHADTRHFKTGSWKTCSPIQSSHSSEVVAALEACIQEHSTEYVRMFGIDPKAKRRISPIMIQRPDGKKVAQKS
TTGNYSVPAATGTTRVGSTTTPNTTGLTPEVVTQVNSLLSQGYKIGTEYANERRFKTSSWQNGPTISETNSAQVLAALEK
FLAEHSGEYVRLIGIDSKVKRRVAEIIIQRPGDSPIQQCVSTSPSYQAPVSTHAGINTRLSQEVVEQVRSLFNQGYRISL
EHANERRFKTSSWISCAPISATNHSQAIAELEQVLAEYNGEYVRLIGIDTQAKRRVMESLIQQPNGKGERSASLKATSNG
VVNTTQQSPVSSSQVATTIAHKLSQEAVEEIRSLIAGGYKIGTEYADKRRFKTSSWKTDIQIDGKREADVFPVLEESLAH
HEGEYVRLIGIDPKAKRRVLEKIIQQPNGKAN

Sequences:

>Translated_672_residues
MPHRKQPAPPTPWSKNLAQPKIDDTAYIHSFSNIIGDVRVGANVLVAPGTSIRADEGTPFFIGAGTNIQDGVVIHGLEQG
RVIGDDQQNYSVWIGTNVSITHKALVHGPCYIGDDCFIGFRSTVFNSRIGEGCIVMLHALIQDVEIPPGKYVPSGAIITN
QQQVNRLSDVLPDDIKFAHHVVGINESLRQGYLCANNISCITPIRNEMNINYKNGNGYNPSGTTGRLTPEVVAHVNQLVS
QGYYVGTEHADTRHFKTGSWKTCSPIQSSHSSEVVAALEACIQEHSTEYVRMFGIDPKAKRRISPIMIQRPDGKKVAQKS
TTGNYSVPAATGTTRVGSTTTPNTTGLTPEVVTQVNSLLSQGYKIGTEYANERRFKTSSWQNGPTISETNSAQVLAALEK
FLAEHSGEYVRLIGIDSKVKRRVAEIIIQRPGDSPIQQCVSTSPSYQAPVSTHAGINTRLSQEVVEQVRSLFNQGYRISL
EHANERRFKTSSWISCAPISATNHSQAIAELEQVLAEYNGEYVRLIGIDTQAKRRVMESLIQQPNGKGERSASLKATSNG
VVNTTQQSPVSSSQVATTIAHKLSQEAVEEIRSLIAGGYKIGTEYADKRRFKTSSWKTDIQIDGKREADVFPVLEESLAH
HEGEYVRLIGIDPKAKRRVLEKIIQQPNGKAN
>Mature_671_residues
PHRKQPAPPTPWSKNLAQPKIDDTAYIHSFSNIIGDVRVGANVLVAPGTSIRADEGTPFFIGAGTNIQDGVVIHGLEQGR
VIGDDQQNYSVWIGTNVSITHKALVHGPCYIGDDCFIGFRSTVFNSRIGEGCIVMLHALIQDVEIPPGKYVPSGAIITNQ
QQVNRLSDVLPDDIKFAHHVVGINESLRQGYLCANNISCITPIRNEMNINYKNGNGYNPSGTTGRLTPEVVAHVNQLVSQ
GYYVGTEHADTRHFKTGSWKTCSPIQSSHSSEVVAALEACIQEHSTEYVRMFGIDPKAKRRISPIMIQRPDGKKVAQKST
TGNYSVPAATGTTRVGSTTTPNTTGLTPEVVTQVNSLLSQGYKIGTEYANERRFKTSSWQNGPTISETNSAQVLAALEKF
LAEHSGEYVRLIGIDSKVKRRVAEIIIQRPGDSPIQQCVSTSPSYQAPVSTHAGINTRLSQEVVEQVRSLFNQGYRISLE
HANERRFKTSSWISCAPISATNHSQAIAELEQVLAEYNGEYVRLIGIDTQAKRRVMESLIQQPNGKGERSASLKATSNGV
VNTTQQSPVSSSQVATTIAHKLSQEAVEEIRSLIAGGYKIGTEYADKRRFKTSSWKTDIQIDGKREADVFPVLEESLAHH
EGEYVRLIGIDPKAKRRVLEKIIQQPNGKAN

Specific function: The presence of two potential DNA-binding regions suggests this protein may be a transcriptional regulator [H]

COG id: COG4451

COG function: function code C; Ribulose bisphosphate carboxylase small subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87081681, Length=124, Percent_Identity=36.2903225806452, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1787667, Length=139, Percent_Identity=32.3741007194245, Blast_Score=66, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017156
- InterPro:   IPR000894
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00101 RuBisCO_small [H]

EC number: NA

Molecular weight: Translated: 73648; Mature: 73517

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHRKQPAPPTPWSKNLAQPKIDDTAYIHSFSNIIGDVRVGANVLVAPGTSIRADEGTPF
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCEE
FIGAGTNIQDGVVIHGLEQGRVIGDDQQNYSVWIGTNVSITHKALVHGPCYIGDDCFIGF
EEECCCCCCCCEEEEECCCCCEECCCCCCEEEEEECCCEEEEHHEECCCEEECCCCEEHH
RSTVFNSRIGEGCIVMLHALIQDVEIPPGKYVPSGAIITNQQQVNRLSDVLPDDIKFAHH
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHCCCHHHHHHHH
VVGINESLRQGYLCANNISCITPIRNEMNINYKNGNGYNPSGTTGRLTPEVVAHVNQLVS
HCCCCHHHHCCCEEECCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
QGYYVGTEHADTRHFKTGSWKTCSPIQSSHSSEVVAALEACIQEHSTEYVRMFGIDPKAK
CCCEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHH
RRISPIMIQRPDGKKVAQKSTTGNYSVPAATGTTRVGSTTTPNTTGLTPEVVTQVNSLLS
HCCCCEEEECCCCHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
QGYKIGTEYANERRFKTSSWQNGPTISETNSAQVLAALEKFLAEHSGEYVRLIGIDSKVK
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
RRVAEIIIQRPGDSPIQQCVSTSPSYQAPVSTHAGINTRLSQEVVEQVRSLFNQGYRISL
HHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
EHANERRFKTSSWISCAPISATNHSQAIAELEQVLAEYNGEYVRLIGIDTQAKRRVMESL
ECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
IQQPNGKGERSASLKATSNGVVNTTQQSPVSSSQVATTIAHKLSQEAVEEIRSLIAGGYK
HHCCCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IGTEYADKRRFKTSSWKTDIQIDGKREADVFPVLEESLAHHEGEYVRLIGIDPKAKRRVL
CCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
EKIIQQPNGKAN
HHHHHCCCCCCC
>Mature Secondary Structure 
PHRKQPAPPTPWSKNLAQPKIDDTAYIHSFSNIIGDVRVGANVLVAPGTSIRADEGTPF
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCEE
FIGAGTNIQDGVVIHGLEQGRVIGDDQQNYSVWIGTNVSITHKALVHGPCYIGDDCFIGF
EEECCCCCCCCEEEEECCCCCEECCCCCCEEEEEECCCEEEEHHEECCCEEECCCCEEHH
RSTVFNSRIGEGCIVMLHALIQDVEIPPGKYVPSGAIITNQQQVNRLSDVLPDDIKFAHH
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHCCCHHHHHHHH
VVGINESLRQGYLCANNISCITPIRNEMNINYKNGNGYNPSGTTGRLTPEVVAHVNQLVS
HCCCCHHHHCCCEEECCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
QGYYVGTEHADTRHFKTGSWKTCSPIQSSHSSEVVAALEACIQEHSTEYVRMFGIDPKAK
CCCEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHH
RRISPIMIQRPDGKKVAQKSTTGNYSVPAATGTTRVGSTTTPNTTGLTPEVVTQVNSLLS
HCCCCEEEECCCCHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
QGYKIGTEYANERRFKTSSWQNGPTISETNSAQVLAALEKFLAEHSGEYVRLIGIDSKVK
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
RRVAEIIIQRPGDSPIQQCVSTSPSYQAPVSTHAGINTRLSQEVVEQVRSLFNQGYRISL
HHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
EHANERRFKTSSWISCAPISATNHSQAIAELEQVLAEYNGEYVRLIGIDTQAKRRVMESL
ECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
IQQPNGKGERSASLKATSNGVVNTTQQSPVSSSQVATTIAHKLSQEAVEEIRSLIAGGYK
HHCCCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IGTEYADKRRFKTSSWKTDIQIDGKREADVFPVLEESLAHHEGEYVRLIGIDPKAKRRVL
CCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
EKIIQQPNGKAN
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: pre-cofactor [C]

Specific reaction: pre-cofactor = cofactor [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8491708 [H]