| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477176
Identifier: 113477176
GI number: 113477176
Start: 5692756
End: 5693073
Strand: Reverse
Name: 113477176
Synonym: Tery_3705
Alternate gene names: NA
Gene position: 5693073-5692756 (Counterclockwise)
Preceding gene: 113477177
Following gene: 113477175
Centisome position: 73.46
GC content: 31.45
Gene sequence:
>318_bases TTGAGGTTGGTTGATATGGTGGAAAATCAGAAAATACCAGTCAAAACAGTATTAATGGATAGCTGGTATGCAACCCAAAG ACTAATGGCTTTAATAGATAATTTAGGTAAAATTTACTATTGCCCTTTAAAAAGCAATGGTTTAGTAGACGATAGTGGGG GTGTAAAAAAGTATCAAAAACTGGAAGAATTAAAATGGAATGAGTGGGAATTAACATCAGGAAAGATTATTAAAATAAAA GGTTTTCCTAGAGATAAAAAAGTTAAATTATTCTGGGGTAGTGTTTCCACAAACTTCAGCAGAATATATTGCTACTAA
Upstream 100 bases:
>100_bases TGCTTATATTTTCATCCTAAAATAGAGCGATTCTGGATAATAGATTATCGTATTTATAATCCAGAAAATGATGAAAAGAG TAAAATAGATAATGTAGAAG
Downstream 100 bases:
>100_bases TGACCTTAGTTGTCAAAGTACAGATGATGTTGAGTTTGAGATTCAAACTAGGTGGAAAATTGAGGAATTCCACAGAGAAA TTAAACAGTTAACAGGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MRLVDMVENQKIPVKTVLMDSWYATQRLMALIDNLGKIYYCPLKSNGLVDDSGGVKKYQKLEELKWNEWELTSGKIIKIK GFPRDKKVKLFWGSVSTNFSRIYCY
Sequences:
>Translated_105_residues MRLVDMVENQKIPVKTVLMDSWYATQRLMALIDNLGKIYYCPLKSNGLVDDSGGVKKYQKLEELKWNEWELTSGKIIKIK GFPRDKKVKLFWGSVSTNFSRIYCY >Mature_105_residues MRLVDMVENQKIPVKTVLMDSWYATQRLMALIDNLGKIYYCPLKSNGLVDDSGGVKKYQKLEELKWNEWELTSGKIIKIK GFPRDKKVKLFWGSVSTNFSRIYCY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12302; Mature: 12302
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVDMVENQKIPVKTVLMDSWYATQRLMALIDNLGKIYYCPLKSNGLVDDSGGVKKYQK CCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCHHHHHH LEELKWNEWELTSGKIIKIKGFPRDKKVKLFWGSVSTNFSRIYCY HHHCCCCCEEECCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEC >Mature Secondary Structure MRLVDMVENQKIPVKTVLMDSWYATQRLMALIDNLGKIYYCPLKSNGLVDDSGGVKKYQK CCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCHHHHHH LEELKWNEWELTSGKIIKIKGFPRDKKVKLFWGSVSTNFSRIYCY HHHCCCCCEEECCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA