| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477177
Identifier: 113477177
GI number: 113477177
Start: 5693060
End: 5693197
Strand: Reverse
Name: 113477177
Synonym: Tery_3706
Alternate gene names: NA
Gene position: 5693197-5693060 (Counterclockwise)
Preceding gene: 113477179
Following gene: 113477176
Centisome position: 73.46
GC content: 29.71
Gene sequence:
>138_bases GTGAGTGGGATAGGAATAGTTAATTGCTTATATTTTCATCCTAAAATAGAGCGATTCTGGATAATAGATTATCGTATTTA TAATCCAGAAAATGATGAAAAGAGTAAAATAGATAATGTAGAAGTTGAGGTTGGTTGA
Upstream 100 bases:
>100_bases GATGGTTATTTAAAGGCCTGATGATACAGTTATTAATAAAAAATATTCCCTAAAAATTGAACTTGTCCGCCGTCAGTACA GTGGAAATGAACATGGGGTA
Downstream 100 bases:
>100_bases TATGGTGGAAAATCAGAAAATACCAGTCAAAACAGTATTAATGGATAGCTGGTATGCAACCCAAAGACTAATGGCTTTAA TAGATAATTTAGGTAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MSGIGIVNCLYFHPKIERFWIIDYRIYNPENDEKSKIDNVEVEVG
Sequences:
>Translated_45_residues MSGIGIVNCLYFHPKIERFWIIDYRIYNPENDEKSKIDNVEVEVG >Mature_44_residues SGIGIVNCLYFHPKIERFWIIDYRIYNPENDEKSKIDNVEVEVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5345; Mature: 5214
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIGIVNCLYFHPKIERFWIIDYRIYNPENDEKSKIDNVEVEVG CCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEC >Mature Secondary Structure SGIGIVNCLYFHPKIERFWIIDYRIYNPENDEKSKIDNVEVEVG CCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA