Click here to switch to the map view.

The map label for this gene is 113476998

Identifier: 113476998

GI number: 113476998

Start: 5389536

End: 5390171

Strand: Reverse

Name: 113476998

Synonym: Tery_3496

Alternate gene names: NA

Gene position: 5390171-5389536 (Counterclockwise)

Preceding gene: 113477000

Following gene: 113476995

Centisome position: 69.55

GC content: 32.86

Gene sequence:

>636_bases
ATGGCTGAGAACCATCTGTCGCTCGAAAATAGAGACTACACATTTATTTTCGCCAGAAGTCATGAAAGCTGGTCTTTTTC
TCATCCTCATTATGAGCATTGGCTTGCAGCCCAAACAAAAATCATTAACTTAGCAAAATTTTGTCAATCATTAGATAATA
GTGGAATTACTGTTTACTTGGCATCAAAACCTTTTGTTAAGGAGACAAACACAGAGGTCATAACATTAGCCAGACTATTT
CAGATTAAAAACCCGCCAAAAAGAATGGATTTAGTAACTAGCCTTGAAGACGCTATTAACGACTATTTTCAACGTCGAGA
TGCCAAGAAAACTCAAAATGGAGATATTATTTTAGTATTAGTAGATAAAATATCTCACGAGCAAAAAGCACTGATTAATT
TAATTATCAATGCTACTAAGAAAATTAATTTTATTCCAGGTACACAAAAGAGCTATGAACTAGGAATTAGTTTTTTACAA
GTAGGAGAAGATCAAGTGACAAAAGAACATCTAAACTACCTTGACGATCGCCTTGTTCAAGTTGGTGCCAAATGTGATAT
TGTAGATACAAAACTATGGTATAAAATCAAAGAAAAATTTATGACAAATATTCTAGTTAGTGCCTTAGTAGATTAA

Upstream 100 bases:

>100_bases
AGTATTCAAATTTACATAGATTAATTAAGATTACCACTATTTTGATCATTAAGAACAAAAAGCTACATTATTCCTCACTA
AAATCTTAGGTAAAAAATCT

Downstream 100 bases:

>100_bases
GAAACTAGATAATCAGGAATCAAAATTTATAGCTAAATTTAGAAGTTAAATTACTAGCATAAATTAAATTTTAGAGCTGG
AGAATATTCAAACTATCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Von Willebrand Factor Type A Domain

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MAENHLSLENRDYTFIFARSHESWSFSHPHYEHWLAAQTKIINLAKFCQSLDNSGITVYLASKPFVKETNTEVITLARLF
QIKNPPKRMDLVTSLEDAINDYFQRRDAKKTQNGDIILVLVDKISHEQKALINLIINATKKINFIPGTQKSYELGISFLQ
VGEDQVTKEHLNYLDDRLVQVGAKCDIVDTKLWYKIKEKFMTNILVSALVD

Sequences:

>Translated_211_residues
MAENHLSLENRDYTFIFARSHESWSFSHPHYEHWLAAQTKIINLAKFCQSLDNSGITVYLASKPFVKETNTEVITLARLF
QIKNPPKRMDLVTSLEDAINDYFQRRDAKKTQNGDIILVLVDKISHEQKALINLIINATKKINFIPGTQKSYELGISFLQ
VGEDQVTKEHLNYLDDRLVQVGAKCDIVDTKLWYKIKEKFMTNILVSALVD
>Mature_210_residues
AENHLSLENRDYTFIFARSHESWSFSHPHYEHWLAAQTKIINLAKFCQSLDNSGITVYLASKPFVKETNTEVITLARLFQ
IKNPPKRMDLVTSLEDAINDYFQRRDAKKTQNGDIILVLVDKISHEQKALINLIINATKKINFIPGTQKSYELGISFLQV
GEDQVTKEHLNYLDDRLVQVGAKCDIVDTKLWYKIKEKFMTNILVSALVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24331; Mature: 24200

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENHLSLENRDYTFIFARSHESWSFSHPHYEHWLAAQTKIINLAKFCQSLDNSGITVYL
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
ASKPFVKETNTEVITLARLFQIKNPPKRMDLVTSLEDAINDYFQRRDAKKTQNGDIILVL
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
VDKISHEQKALINLIINATKKINFIPGTQKSYELGISFLQVGEDQVTKEHLNYLDDRLVQ
ECCCCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VGAKCDIVDTKLWYKIKEKFMTNILVSALVD
HCCCCEEECHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AENHLSLENRDYTFIFARSHESWSFSHPHYEHWLAAQTKIINLAKFCQSLDNSGITVYL
CCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
ASKPFVKETNTEVITLARLFQIKNPPKRMDLVTSLEDAINDYFQRRDAKKTQNGDIILVL
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
VDKISHEQKALINLIINATKKINFIPGTQKSYELGISFLQVGEDQVTKEHLNYLDDRLVQ
ECCCCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VGAKCDIVDTKLWYKIKEKFMTNILVSALVD
HCCCCEEECHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA