The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476981

Identifier: 113476981

GI number: 113476981

Start: 5357567

End: 5358226

Strand: Reverse

Name: 113476981

Synonym: Tery_3479

Alternate gene names: NA

Gene position: 5358226-5357567 (Counterclockwise)

Preceding gene: 113476982

Following gene: 113476980

Centisome position: 69.14

GC content: 26.82

Gene sequence:

>660_bases
ATGTCAAAACAAAATGGAATTATATATCAACTTTTACAAGAAAGAGATATAGAGCAAGCAATTAACTGTTTAATTGATGT
ATTTACTAGTGCAGAGCCGATTACAAAAGAACTTAAAATTTCTCCTAACGAGTTTTATCCTTTTGCTAAGATAATTTGCC
AAAAAGCTGTAGAAGATAAATTATCTGTGATTGCTAAAGAACCGGTTAATTATCAAGTTGTAGGGTTTATTATTTCACAG
GATTTATCAAATAACTTATCTGAAGAAATCTACAATAATATTTGTCAAAATCAAAAAATGGATACTCTTTTTCAATTTTT
AAAAGAGCTAAATGAGCAATACGAAATACATAAAACAAACCTGATAAGCAAGGTATTTTATATTTTTTTATTAGGAGTTA
GAGAAGAATATAAAAACAAAAATATTGGTAAGAAATTACTTGAACATAATCTCAAAATAGCAAGTGAAGAAAAATTTTCA
TTGGTTAAAGTAGAAGCTACTGGCAATAAATCCCAGCACATTTTTAGAAACTATGGGTTTAAGGATAAGTGTTCAATAGA
TTACCAGAACTATGAATATCAAGGAATCAAAATATTTGAGGGAATAAAAGAACATAAAAGTTGTATTTTAATGGAAAAAT
TGCTTATACCACTTTCCTAA

Upstream 100 bases:

>100_bases
AAACTACGATACTTAAGCATTAAGTAAAAATCAAAATTCCTATAATCTTATATCAAAGTTGTTTCAAGAGTTCAAAATTG
TTTGAGGAGTTAATATAACT

Downstream 100 bases:

>100_bases
AAAGAATCCACTAACGTAATGTGAAGTGCATTTCAATAAGGGTAGCTTAAAAATAGCTACTCCCATCAATTTTTAATTTG
TCCGTTTTTTTTTGCGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSKQNGIIYQLLQERDIEQAINCLIDVFTSAEPITKELKISPNEFYPFAKIICQKAVEDKLSVIAKEPVNYQVVGFIISQ
DLSNNLSEEIYNNICQNQKMDTLFQFLKELNEQYEIHKTNLISKVFYIFLLGVREEYKNKNIGKKLLEHNLKIASEEKFS
LVKVEATGNKSQHIFRNYGFKDKCSIDYQNYEYQGIKIFEGIKEHKSCILMEKLLIPLS

Sequences:

>Translated_219_residues
MSKQNGIIYQLLQERDIEQAINCLIDVFTSAEPITKELKISPNEFYPFAKIICQKAVEDKLSVIAKEPVNYQVVGFIISQ
DLSNNLSEEIYNNICQNQKMDTLFQFLKELNEQYEIHKTNLISKVFYIFLLGVREEYKNKNIGKKLLEHNLKIASEEKFS
LVKVEATGNKSQHIFRNYGFKDKCSIDYQNYEYQGIKIFEGIKEHKSCILMEKLLIPLS
>Mature_218_residues
SKQNGIIYQLLQERDIEQAINCLIDVFTSAEPITKELKISPNEFYPFAKIICQKAVEDKLSVIAKEPVNYQVVGFIISQD
LSNNLSEEIYNNICQNQKMDTLFQFLKELNEQYEIHKTNLISKVFYIFLLGVREEYKNKNIGKKLLEHNLKIASEEKFSL
VKVEATGNKSQHIFRNYGFKDKCSIDYQNYEYQGIKIFEGIKEHKSCILMEKLLIPLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI23397447, Length=178, Percent_Identity=25.2808988764045, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25564; Mature: 25433

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQNGIIYQLLQERDIEQAINCLIDVFTSAEPITKELKISPNEFYPFAKIICQKAVEDK
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHH
LSVIAKEPVNYQVVGFIISQDLSNNLSEEIYNNICQNQKMDTLFQFLKELNEQYEIHKTN
HHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LISKVFYIFLLGVREEYKNKNIGKKLLEHNLKIASEEKFSLVKVEATGNKSQHIFRNYGF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCC
KDKCSIDYQNYEYQGIKIFEGIKEHKSCILMEKLLIPLS
CCCCEECCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKQNGIIYQLLQERDIEQAINCLIDVFTSAEPITKELKISPNEFYPFAKIICQKAVEDK
CCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHH
LSVIAKEPVNYQVVGFIISQDLSNNLSEEIYNNICQNQKMDTLFQFLKELNEQYEIHKTN
HHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LISKVFYIFLLGVREEYKNKNIGKKLLEHNLKIASEEKFSLVKVEATGNKSQHIFRNYGF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCC
KDKCSIDYQNYEYQGIKIFEGIKEHKSCILMEKLLIPLS
CCCCEECCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA