Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
---|---|
Accession | NC_008312 |
Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113476600
Identifier: 113476600
GI number: 113476600
Start: 4687980
End: 4688210
Strand: Reverse
Name: 113476600
Synonym: Tery_3037
Alternate gene names: NA
Gene position: 4688210-4687980 (Counterclockwise)
Preceding gene: 113476601
Following gene: 113476599
Centisome position: 60.49
GC content: 29.0
Gene sequence:
>231_bases GTGTTAGGTAAGTATTTATCTAAAAAAGTAGGGGGTTTTAAACAATATAAAAATGCACAAGTTAAAATTGCTAAATTTCA TGGGAAACAAAAGAACATAAAAACAGATTTTATGGATAAATTATCTACTAAAATAATTAGTGAAAACCAAACAATTGATT TTTGTAGAGGTATTATATGTTTCTTTAGTGGTCAAAAGCGTAACCCGTCCCCAAGAGGTTTGGGTCTCTAA
Upstream 100 bases:
>100_bases ACTTTTGCTACTTTGAGTAAAAGTAATAAAATTCATGCACAAAAACTCTTAAAGAAAAAGATTAATCAGTAAGTGCCCTC TTTCATAGGATCTGTGTAAC
Downstream 100 bases:
>100_bases TGAATGGTTATGAAGTAATGCCGAAACCTTGTTAGAAGGAAAGGCAAAAAAATATAGCCGCAGTCATAGAGTAATTCGAC GTTGAGAACTAACATTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MLGKYLSKKVGGFKQYKNAQVKIAKFHGKQKNIKTDFMDKLSTKIISENQTIDFCRGIICFFSGQKRNPSPRGLGL
Sequences:
>Translated_76_residues MLGKYLSKKVGGFKQYKNAQVKIAKFHGKQKNIKTDFMDKLSTKIISENQTIDFCRGIICFFSGQKRNPSPRGLGL >Mature_76_residues MLGKYLSKKVGGFKQYKNAQVKIAKFHGKQKNIKTDFMDKLSTKIISENQTIDFCRGIICFFSGQKRNPSPRGLGL
Specific function: Unknown
COG id: COG0675
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8627; Mature: 8627
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGKYLSKKVGGFKQYKNAQVKIAKFHGKQKNIKTDFMDKLSTKIISENQTIDFCRGIIC CCCHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH FFSGQKRNPSPRGLGL HCCCCCCCCCCCCCCC >Mature Secondary Structure MLGKYLSKKVGGFKQYKNAQVKIAKFHGKQKNIKTDFMDKLSTKIISENQTIDFCRGIIC CCCHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH FFSGQKRNPSPRGLGL HCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA