| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is hldE [H]
Identifier: 113476601
GI number: 113476601
Start: 4688863
End: 4689375
Strand: Reverse
Name: hldE [H]
Synonym: Tery_3038
Alternate gene names: 113476601
Gene position: 4689375-4688863 (Counterclockwise)
Preceding gene: 113476610
Following gene: 113476600
Centisome position: 60.51
GC content: 34.5
Gene sequence:
>513_bases ATGGACTCCCAAAAACTAATTTCTGGCCTATACAATTTAACTGAACTAGAACAACTAATTAATTCTCAAGCAACTTTTTG GCGACCTTTAGTATTTACAAATGGGTGCTTCGACTTAATTCATGCTGGACATGTTCGTTATTTGTGGGCAACTAAGTCTC TAGGGCGATCGCTTATAGTAGGATTAAATAGTGATTGGTCAGTGCAAAATCTTAAACCCCAAAAAGAGGGATACCCAATG CGACCAATTATACCACAAACCCAACGGGCTGAAGTTTTAGCAGCTCTCAAACCGGTTGATGGAGTAGTAATTTTTAATGA AACTACTGCTACTAAAATAATAGAACGACTTAAACCTGATATTTATGTTAAAGGTGGCGATTATTCTGTTGAAACATTAC CAGAAGCTCAAAAAGTAAAAAATTATGGTGGTAAAGTATCTATAATTCAAATAGAAGTGCCAACTTCTACTACTGGAATT ATTAATAGTATTTTACCAAAAAATTCGGTTTAA
Upstream 100 bases:
>100_bases TTCTCTCCCAGTTTAGTTCATTATGCTTTTGAACATAAATATCAAACACCTACTGAAGAAGATATAAATTAAGGTGAAGT ATCAAGGGACATAAGAAAAA
Downstream 100 bases:
>100_bases AACATCGGCCATAAGCGAAAATACTGATAGTGCAAAGCTCATAATAGCTGTGTCCATTTTGTGTTGAATGATAGTCTAGC TTTATGATTATAAAAAGTAA
Product: cytidyltransferase-like protein
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MDSQKLISGLYNLTELEQLINSQATFWRPLVFTNGCFDLIHAGHVRYLWATKSLGRSLIVGLNSDWSVQNLKPQKEGYPM RPIIPQTQRAEVLAALKPVDGVVIFNETTATKIIERLKPDIYVKGGDYSVETLPEAQKVKNYGGKVSIIQIEVPTSTTGI INSILPKNSV
Sequences:
>Translated_170_residues MDSQKLISGLYNLTELEQLINSQATFWRPLVFTNGCFDLIHAGHVRYLWATKSLGRSLIVGLNSDWSVQNLKPQKEGYPM RPIIPQTQRAEVLAALKPVDGVVIFNETTATKIIERLKPDIYVKGGDYSVETLPEAQKVKNYGGKVSIIQIEVPTSTTGI INSILPKNSV >Mature_170_residues MDSQKLISGLYNLTELEQLINSQATFWRPLVFTNGCFDLIHAGHVRYLWATKSLGRSLIVGLNSDWSVQNLKPQKEGYPM RPIIPQTQRAEVLAALKPVDGVVIFNETTATKIIERLKPDIYVKGGDYSVETLPEAQKVKNYGGKVSIIQIEVPTSTTGI INSILPKNSV
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789432, Length=156, Percent_Identity=41.025641025641, Blast_Score=110, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 18897; Mature: 18897
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSQKLISGLYNLTELEQLINSQATFWRPLVFTNGCFDLIHAGHVRYLWATKSLGRSLIV CCHHHHHHHHHHHHHHHHHHCCCCHHEEHHHCCCCHHHHHHCCCEEEEEECHHCCCEEEE GLNSDWSVQNLKPQKEGYPMRPIIPQTQRAEVLAALKPVDGVVIFNETTATKIIERLKPD ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCC IYVKGGDYSVETLPEAQKVKNYGGKVSIIQIEVPTSTTGIINSILPKNSV EEEECCCCCHHCCCCHHHHHHCCCEEEEEEEECCCCCHHHHHHHCCCCCC >Mature Secondary Structure MDSQKLISGLYNLTELEQLINSQATFWRPLVFTNGCFDLIHAGHVRYLWATKSLGRSLIV CCHHHHHHHHHHHHHHHHHHCCCCHHEEHHHCCCCHHHHHHCCCEEEEEECHHCCCEEEE GLNSDWSVQNLKPQKEGYPMRPIIPQTQRAEVLAALKPVDGVVIFNETTATKIIERLKPD ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCC IYVKGGDYSVETLPEAQKVKNYGGKVSIIQIEVPTSTTGIINSILPKNSV EEEECCCCCHHCCCCHHHHHHCCCEEEEEEEECCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA