The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476477

Identifier: 113476477

GI number: 113476477

Start: 4504076

End: 4504615

Strand: Reverse

Name: 113476477

Synonym: Tery_2897

Alternate gene names: NA

Gene position: 4504615-4504076 (Counterclockwise)

Preceding gene: 113476479

Following gene: 113476475

Centisome position: 58.12

GC content: 37.41

Gene sequence:

>540_bases
ATGCAATTACAAAATTTGCTGTCCCGTAGTCCATTAATTATCTTGGGCGCCCTCGCTGGAGTTATGCTCTCTCATCAAAG
AGCGATCGCAACCAGCAAAATCGTCATAGATATAGCTGGGCCAATAAAAGCATCCATAAAAGTTAAGGATCTACGACTAT
TTGCAGAAACTGGTGAAACTACCAAAACAATTTCTCAAGCTCTAGCCATATCAAAAGTTAACCCTAATACAGTTCGTGGA
TTAATGACATTAGAAGTAGGAGCAGGTGTGACGAACCTAGCCAAAGTTCTGTATAGTAACCTAGGTCAAAATGTAACAAA
AGGTGTCGCTGAAGTACTTCAAACGAAACACAACTATGAAAGTGACAAAGCCTTACGTTCTGCTATTATCCTAGCAGCAG
CAGATGATAACCGAATATCAGTCCTAGAAATTCTCGAAAAATATCCTACCGAAGAAATGCATATCGACGTTGGTAAAATC
AACGAAATTGTAGAAAAACTTAAAGATACTATAGGTAATTTAGGAAAACTATTTAATTAA

Upstream 100 bases:

>100_bases
GCCCTAAGTTAATAAAATTAGTCTAATAAAAAATAGGTTGACAAATTATCCAGAAATTTGTATCTAAAAGCTTAGATTAA
AATCTAACTCAATATTAACC

Downstream 100 bases:

>100_bases
GTTCTGCCTGACAGGAACTTCGACACAGAGAGATTTCTAAACCTCATGCTTTTAGGTTTGTAATTATTAAGCACTGAACA
GCAAGTGTCAGAAAGCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MQLQNLLSRSPLIILGALAGVMLSHQRAIATSKIVIDIAGPIKASIKVKDLRLFAETGETTKTISQALAISKVNPNTVRG
LMTLEVGAGVTNLAKVLYSNLGQNVTKGVAEVLQTKHNYESDKALRSAIILAAADDNRISVLEILEKYPTEEMHIDVGKI
NEIVEKLKDTIGNLGKLFN

Sequences:

>Translated_179_residues
MQLQNLLSRSPLIILGALAGVMLSHQRAIATSKIVIDIAGPIKASIKVKDLRLFAETGETTKTISQALAISKVNPNTVRG
LMTLEVGAGVTNLAKVLYSNLGQNVTKGVAEVLQTKHNYESDKALRSAIILAAADDNRISVLEILEKYPTEEMHIDVGKI
NEIVEKLKDTIGNLGKLFN
>Mature_179_residues
MQLQNLLSRSPLIILGALAGVMLSHQRAIATSKIVIDIAGPIKASIKVKDLRLFAETGETTKTISQALAISKVNPNTVRG
LMTLEVGAGVTNLAKVLYSNLGQNVTKGVAEVLQTKHNYESDKALRSAIILAAADDNRISVLEILEKYPTEEMHIDVGKI
NEIVEKLKDTIGNLGKLFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19328; Mature: 19328

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLQNLLSRSPLIILGALAGVMLSHQRAIATSKIVIDIAGPIKASIKVKDLRLFAETGET
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEHHHHHHHHHCCCH
TKTISQALAISKVNPNTVRGLMTLEVGAGVTNLAKVLYSNLGQNVTKGVAEVLQTKHNYE
HHHHHHHHHHCCCCCHHHHHEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
SDKALRSAIILAAADDNRISVLEILEKYPTEEMHIDVGKINEIVEKLKDTIGNLGKLFN
HHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLQNLLSRSPLIILGALAGVMLSHQRAIATSKIVIDIAGPIKASIKVKDLRLFAETGET
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEHHHHHHHHHCCCH
TKTISQALAISKVNPNTVRGLMTLEVGAGVTNLAKVLYSNLGQNVTKGVAEVLQTKHNYE
HHHHHHHHHHCCCCCHHHHHEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
SDKALRSAIILAAADDNRISVLEILEKYPTEEMHIDVGKINEIVEKLKDTIGNLGKLFN
HHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA