| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113476464
Identifier: 113476464
GI number: 113476464
Start: 4486042
End: 4486311
Strand: Reverse
Name: 113476464
Synonym: Tery_2879
Alternate gene names: NA
Gene position: 4486311-4486042 (Counterclockwise)
Preceding gene: 113476467
Following gene: 113476463
Centisome position: 57.89
GC content: 39.26
Gene sequence:
>270_bases ATGAATGTAGCTGATTTGAAAATAGGACAAATAGCGATAGTAGATAAAGTCCTCAACCTTGATGGCGGACAAGGAACTGT TCAGAGATTAGCAGCAATGGGAGTAGTTTCTGATAAATCAGTACAAGTCTTGCGAAAGGCTAGATTTAATGGGCCCTTAC ACATTCGAGTCGGAGCTACTACAGAAATAGCTATCCGACCCCATGAAGCGGAAATGATAGTTATTAGAACAGATAGGGAT GATGAAATAAATTTCTCTGAAGGTTCTTAA
Upstream 100 bases:
>100_bases TAATCCTACATTCTGGAGGTTAAACAGTGCCATATTCTACCTAACCTATATTGGTTTAAATAGGCCAAAATAAAATTATA ACAATAAAATCAAAGTTGAA
Downstream 100 bases:
>100_bases ATGATTCCTTAAGCATGGCAAGCTCATCTAAAATTTTATTGACAAATCAATATTTTTATGATACCAAATGTTAAGAATCT TTTCAAAAAATTACAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MNVADLKIGQIAIVDKVLNLDGGQGTVQRLAAMGVVSDKSVQVLRKARFNGPLHIRVGATTEIAIRPHEAEMIVIRTDRD DEINFSEGS
Sequences:
>Translated_89_residues MNVADLKIGQIAIVDKVLNLDGGQGTVQRLAAMGVVSDKSVQVLRKARFNGPLHIRVGATTEIAIRPHEAEMIVIRTDRD DEINFSEGS >Mature_89_residues MNVADLKIGQIAIVDKVLNLDGGQGTVQRLAAMGVVSDKSVQVLRKARFNGPLHIRVGATTEIAIRPHEAEMIVIRTDRD DEINFSEGS
Specific function: Unknown
COG id: COG1918
COG function: function code P; Fe2+ transport system protein A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9667; Mature: 9667
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVADLKIGQIAIVDKVLNLDGGQGTVQRLAAMGVVSDKSVQVLRKARFNGPLHIRVGAT CCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCC TEIAIRPHEAEMIVIRTDRDDEINFSEGS EEEEEECCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MNVADLKIGQIAIVDKVLNLDGGQGTVQRLAAMGVVSDKSVQVLRKARFNGPLHIRVGAT CCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCC TEIAIRPHEAEMIVIRTDRDDEINFSEGS EEEEEECCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA