| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476384
Identifier: 113476384
GI number: 113476384
Start: 4335620
End: 4335760
Strand: Reverse
Name: 113476384
Synonym: Tery_2796
Alternate gene names: NA
Gene position: 4335760-4335620 (Counterclockwise)
Preceding gene: 113476385
Following gene: 113476382
Centisome position: 55.94
GC content: 42.55
Gene sequence:
>141_bases ATGTCTGACCTTGACCGTGGCATAATGAAATTTAAGGGAGCAGATACTCCCAGGGCGATCGCTATTTCTGCGATTCTTAT CTTAGGTAGTATAGTCTTTCTCCTTTTCTGGGGACTTAATACTGCTTACACAGTTGGTTAG
Upstream 100 bases:
>100_bases ATGATTTTTCCCTCCGTTACTCCTACCATAGTGATCAAAATAGAGGTATTTATAGAAATTATCAGTTAAAATAAAAAGCA TAATTTAGGAGATCAATACT
Downstream 100 bases:
>100_bases TTAATACTAATCCAAACTTTTTAGAGGCGTTCCTGTGGAACGTCTCTAACTATTATCATGGTATAATAGTTTTCAATTTC TTAGAAAATTTAAAATTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 45
Protein sequence:
>46_residues MSDLDRGIMKFKGADTPRAIAISAILILGSIVFLLFWGLNTAYTVG
Sequences:
>Translated_46_residues MSDLDRGIMKFKGADTPRAIAISAILILGSIVFLLFWGLNTAYTVG >Mature_45_residues SDLDRGIMKFKGADTPRAIAISAILILGSIVFLLFWGLNTAYTVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4958; Mature: 4827
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLDRGIMKFKGADTPRAIAISAILILGSIVFLLFWGLNTAYTVG CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure SDLDRGIMKFKGADTPRAIAISAILILGSIVFLLFWGLNTAYTVG CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA