| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is fusA [C]
Identifier: 113476366
GI number: 113476366
Start: 4296676
End: 4298742
Strand: Reverse
Name: fusA [C]
Synonym: Tery_2771
Alternate gene names: 113476366
Gene position: 4298742-4296676 (Counterclockwise)
Preceding gene: 113476367
Following gene: 113476365
Centisome position: 55.47
GC content: 41.22
Gene sequence:
>2067_bases ATGTCAGAAAAAGTCGCTTCAAATGTCAGGAATATTGCCATAGTAGGCCCTTATTTAAGTGGAAAAACAACATTACTAGA AAGCCTATTATCAATTACAAAAGCAATATCCCGTAAAGGCAGTGTTAAAGATGGTAACACCATTGGAGATGGTAGTCCAG AAGCTCGCGATCGCTCCATGACAGTAGAAATAAATGCCGCTAGTACTAAGTACGACGGCATTAACTTTACCTTTCTAGAC TGCCCTGGTTCCATAGAATTTGCTCAAGAAACCAATAACGCTCTTATTGGAGCAGGGGCAGCAATAGTCGTGTGTGAACC AGACCCAGCTCGTGTTCTAACCCTTGCTCCACTATTAAAATTTCTTGATGACTGGGAAATTCCTCATATAGTCTTCATCA ACAAAATGGATCGGGTCTGTAGGGATGAAACTCATTGTAAATCTAACTTTGGTGAAGTATTAGAAGCACTCAAAACTGTA TCCAACCGCCCCATTGTTCCCCATCAATACCCCATTGCTAAAAATAACCAACTTATTGGATTTATTGACCTAGTAACTGA ACAAGCTTATCATTATCATCCAGGGGCGCCATCAGACCCTGTAACAATTCCTGAGTCTTTGAAAGTAGAAGAACAAGCTG CTAGAGAACAAATGCTGGAAGAGTTAGCTAATTTTGATGATAATTTATTGGAAGAGTTGGTCGAAAATATCGAACCACCT ACTGAAGAAATAGTTGCTGACATCAAAATGGAGTTAAGTGCAGATTTAATTGTACCTGTATTTGTAGGGGTGGCAGAAAA AGATTCTGGTGTGCGTTCCCTCCTAGATGCTCTGGTGCGAGAAACTCCTGTACCAAAAGAAACGGCAAAACGTCGAGGTT TAAAATCAAATTCTGAAACACCTATTGCTCAAGTTTTGAAAACTTACTACACTCCTCAAGGTGGTAAACTCTCATTAGTT CGGGTATGGCAAGGGGAAATTATTGATGGCATGATTTTAAATGGAGTGCGCATCGGTGGAATATATCGGTTGATGGGTCA GCAAACAGAAAGTCTAGAGTTAGCTAAAACTGGAGAAATAGTTGCCCTCAGTCGGATGGAAGGTATACATACAGGTGATA CTTTAACTATAGATGCAGATGGGAAAACTAAGTTGCCAAGAGTAATACTATTGCCTCCTGTTTTTGCTATGGCGATCGCT CCGGAAAACCGTAAAGATGAAGTAAAAATGAGCAGCGCTTTAACAAAGTTGCTAGAAGAAGACCCGGCATTAATATGGGA ACAACATGGGGATACTCACGAAGTCATCTTTTGGGGTCAAGGAGAAATTCATCTACAGGTAAGTTTAGAGCGTTTGCACC GAAAGTATAATGTTTCGATGAAAACTTACTTACCCCGAGTTCCCTATAAAGAAACTATTCGGAAAAAGACTACTTCTCAT GGTCGTTATAAACATCAAAGTGGGGGTCATGGGCAGTTTGGGGATGTGTATTTAGATATTCAACCGTTGCCACGGGGGTC AGGTTTTAATTTTAGTGAAACTGTTGTCGGTGGAGTGGTGCCGAAGCAATATATTTCTGGTGTGGAAACAGGGGTGCGGG AATATCTTCAACAGGGTCCTCTCGGTTTTCCCGTGGTTGATGTGGCGGTGACGTTGACTAATGGGTCGCATCATTCTGTT GATAGTTCGGAGCAAGCATTTAAGCAGGCAGCGCGAGTGGCAATGCAGCAGGGAATGAGTGACTGCCAACCAGTATTGTT GGAACCTATTGCTTTGGTGGATATTTTTGCACCTAATGAGTTTACTTCAAAAGTTTTGCAGTTAATTAGTATCCGTCGTG GTCAGATATTGGGTTATGAAAGTATGACTGACTGGGAAAGGTGGGATAAGACTTCTGCTTATTTGGCTTTGTCAGAAATG CAAGATTTAATTGTGGAGTTGCGATCGCAAACAATGGGAGTGGGTTCTTTTAATTGGCAATTTGATCATTTACAAGAAGT GCCAAATAAGTTAGCTGAAAAGGTCTTGATCAAGAATGGTAATGGTAATGGTCGTGGTCATGGCTAA
Upstream 100 bases:
>100_bases TAGCTTGTAGAGTATAAAAAAAATATATAAAATCTAACAAAAAAAGCTATTTTGTCAATTATCAATGCTGAATCATTAAG CATTCGCCAGGAGGATAATT
Downstream 100 bases:
>100_bases ACTACTTTAATATTTAAATGAAAAGTAGATATAGTTTAATTATTAACAGGACTTATTCACAAGTACCTAGGAACCTGGTT TTTTTATGGATGTCTATTGT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: NA
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MSEKVASNVRNIAIVGPYLSGKTTLLESLLSITKAISRKGSVKDGNTIGDGSPEARDRSMTVEINAASTKYDGINFTFLD CPGSIEFAQETNNALIGAGAAIVVCEPDPARVLTLAPLLKFLDDWEIPHIVFINKMDRVCRDETHCKSNFGEVLEALKTV SNRPIVPHQYPIAKNNQLIGFIDLVTEQAYHYHPGAPSDPVTIPESLKVEEQAAREQMLEELANFDDNLLEELVENIEPP TEEIVADIKMELSADLIVPVFVGVAEKDSGVRSLLDALVRETPVPKETAKRRGLKSNSETPIAQVLKTYYTPQGGKLSLV RVWQGEIIDGMILNGVRIGGIYRLMGQQTESLELAKTGEIVALSRMEGIHTGDTLTIDADGKTKLPRVILLPPVFAMAIA PENRKDEVKMSSALTKLLEEDPALIWEQHGDTHEVIFWGQGEIHLQVSLERLHRKYNVSMKTYLPRVPYKETIRKKTTSH GRYKHQSGGHGQFGDVYLDIQPLPRGSGFNFSETVVGGVVPKQYISGVETGVREYLQQGPLGFPVVDVAVTLTNGSHHSV DSSEQAFKQAARVAMQQGMSDCQPVLLEPIALVDIFAPNEFTSKVLQLISIRRGQILGYESMTDWERWDKTSAYLALSEM QDLIVELRSQTMGVGSFNWQFDHLQEVPNKLAEKVLIKNGNGNGRGHG
Sequences:
>Translated_688_residues MSEKVASNVRNIAIVGPYLSGKTTLLESLLSITKAISRKGSVKDGNTIGDGSPEARDRSMTVEINAASTKYDGINFTFLD CPGSIEFAQETNNALIGAGAAIVVCEPDPARVLTLAPLLKFLDDWEIPHIVFINKMDRVCRDETHCKSNFGEVLEALKTV SNRPIVPHQYPIAKNNQLIGFIDLVTEQAYHYHPGAPSDPVTIPESLKVEEQAAREQMLEELANFDDNLLEELVENIEPP TEEIVADIKMELSADLIVPVFVGVAEKDSGVRSLLDALVRETPVPKETAKRRGLKSNSETPIAQVLKTYYTPQGGKLSLV RVWQGEIIDGMILNGVRIGGIYRLMGQQTESLELAKTGEIVALSRMEGIHTGDTLTIDADGKTKLPRVILLPPVFAMAIA PENRKDEVKMSSALTKLLEEDPALIWEQHGDTHEVIFWGQGEIHLQVSLERLHRKYNVSMKTYLPRVPYKETIRKKTTSH GRYKHQSGGHGQFGDVYLDIQPLPRGSGFNFSETVVGGVVPKQYISGVETGVREYLQQGPLGFPVVDVAVTLTNGSHHSV DSSEQAFKQAARVAMQQGMSDCQPVLLEPIALVDIFAPNEFTSKVLQLISIRRGQILGYESMTDWERWDKTSAYLALSEM QDLIVELRSQTMGVGSFNWQFDHLQEVPNKLAEKVLIKNGNGNGRGHG >Mature_687_residues SEKVASNVRNIAIVGPYLSGKTTLLESLLSITKAISRKGSVKDGNTIGDGSPEARDRSMTVEINAASTKYDGINFTFLDC PGSIEFAQETNNALIGAGAAIVVCEPDPARVLTLAPLLKFLDDWEIPHIVFINKMDRVCRDETHCKSNFGEVLEALKTVS NRPIVPHQYPIAKNNQLIGFIDLVTEQAYHYHPGAPSDPVTIPESLKVEEQAAREQMLEELANFDDNLLEELVENIEPPT EEIVADIKMELSADLIVPVFVGVAEKDSGVRSLLDALVRETPVPKETAKRRGLKSNSETPIAQVLKTYYTPQGGKLSLVR VWQGEIIDGMILNGVRIGGIYRLMGQQTESLELAKTGEIVALSRMEGIHTGDTLTIDADGKTKLPRVILLPPVFAMAIAP ENRKDEVKMSSALTKLLEEDPALIWEQHGDTHEVIFWGQGEIHLQVSLERLHRKYNVSMKTYLPRVPYKETIRKKTTSHG RYKHQSGGHGQFGDVYLDIQPLPRGSGFNFSETVVGGVVPKQYISGVETGVREYLQQGPLGFPVVDVAVTLTNGSHHSVD SSEQAFKQAARVAMQQGMSDCQPVLLEPIALVDIFAPNEFTSKVLQLISIRRGQILGYESMTDWERWDKTSAYLALSEMQ DLIVELRSQTMGVGSFNWQFDHLQEVPNKLAEKVLIKNGNGNGRGHG
Specific function: This Protein Promotes The GTP-Dependent Translocation Of The Nascent Protein Chain From The A-Site To The P-Site Of The Ribosome. [C]
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=701, Percent_Identity=29.1012838801712, Blast_Score=282, Evalue=7e-76, Organism=Homo sapiens, GI19923640, Length=710, Percent_Identity=24.7887323943662, Blast_Score=169, Evalue=1e-41, Organism=Homo sapiens, GI25306283, Length=389, Percent_Identity=25.9640102827763, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI25306287, Length=281, Percent_Identity=25.6227758007117, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1789738, Length=711, Percent_Identity=32.0675105485232, Blast_Score=325, Evalue=7e-90, Organism=Escherichia coli, GI1790835, Length=471, Percent_Identity=23.7791932059448, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17533571, Length=683, Percent_Identity=28.8433382137628, Blast_Score=275, Evalue=6e-74, Organism=Caenorhabditis elegans, GI17556745, Length=695, Percent_Identity=23.1654676258993, Blast_Score=120, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323098, Length=687, Percent_Identity=31.2954876273654, Blast_Score=288, Evalue=2e-78, Organism=Saccharomyces cerevisiae, GI6322359, Length=783, Percent_Identity=23.7547892720307, Blast_Score=164, Evalue=3e-41, Organism=Drosophila melanogaster, GI24582462, Length=686, Percent_Identity=31.7784256559767, Blast_Score=292, Evalue=6e-79, Organism=Drosophila melanogaster, GI221458488, Length=737, Percent_Identity=24.1519674355495, Blast_Score=164, Evalue=1e-40,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 75995; Mature: 75864
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKVASNVRNIAIVGPYLSGKTTLLESLLSITKAISRKGSVKDGNTIGDGSPEARDRSM CCCHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE TVEINAASTKYDGINFTFLDCPGSIEFAQETNNALIGAGAAIVVCEPDPARVLTLAPLLK EEEEEECCCEECCEEEEEEECCCCCCHHHCCCCEEEECCEEEEEECCCCCHHHHHHHHHH FLDDWEIPHIVFINKMDRVCRDETHCKSNFGEVLEALKTVSNRPIVPHQYPIAKNNQLIG HHHCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE FIDLVTEQAYHYHPGAPSDPVTIPESLKVEEQAAREQMLEELANFDDNLLEELVENIEPP HHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC TEEIVADIKMELSADLIVPVFVGVAEKDSGVRSLLDALVRETPVPKETAKRRGLKSNSET HHHHHHHHHHHHCCCEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC PIAQVLKTYYTPQGGKLSLVRVWQGEIIDGMILNGVRIGGIYRLMGQQTESLELAKTGEI HHHHHHHHHCCCCCCCEEEEEEECCCHHCCEEECCEEECHHHHHHCCCCCCEEHHCCCCE VALSRMEGIHTGDTLTIDADGKTKLPRVILLPPVFAMAIAPENRKDEVKMSSALTKLLEE EEEECCCCCCCCCEEEEECCCCCCCCEEEEECCHHHEEECCCCCHHHHHHHHHHHHHHHC DPALIWEQHGDTHEVIFWGQGEIHLQVSLERLHRKYNVSMKTYLPRVPYKETIRKKTTSH CCCEEEECCCCEEEEEEECCCEEEEEEEHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCC GRYKHQSGGHGQFGDVYLDIQPLPRGSGFNFSETVVGGVVPKQYISGVETGVREYLQQGP CCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC LGFPVVDVAVTLTNGSHHSVDSSEQAFKQAARVAMQQGMSDCQPVLLEPIALVDIFAPNE CCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCH FTSKVLQLISIRRGQILGYESMTDWERWDKTSAYLALSEMQDLIVELRSQTMGVGSFNWQ HHHHHHHHHHHHCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC FDHLQEVPNKLAEKVLIKNGNGNGRGHG HHHHHHHHHHHHHHHEEECCCCCCCCCC >Mature Secondary Structure SEKVASNVRNIAIVGPYLSGKTTLLESLLSITKAISRKGSVKDGNTIGDGSPEARDRSM CCHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE TVEINAASTKYDGINFTFLDCPGSIEFAQETNNALIGAGAAIVVCEPDPARVLTLAPLLK EEEEEECCCEECCEEEEEEECCCCCCHHHCCCCEEEECCEEEEEECCCCCHHHHHHHHHH FLDDWEIPHIVFINKMDRVCRDETHCKSNFGEVLEALKTVSNRPIVPHQYPIAKNNQLIG HHHCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE FIDLVTEQAYHYHPGAPSDPVTIPESLKVEEQAAREQMLEELANFDDNLLEELVENIEPP HHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC TEEIVADIKMELSADLIVPVFVGVAEKDSGVRSLLDALVRETPVPKETAKRRGLKSNSET HHHHHHHHHHHHCCCEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC PIAQVLKTYYTPQGGKLSLVRVWQGEIIDGMILNGVRIGGIYRLMGQQTESLELAKTGEI HHHHHHHHHCCCCCCCEEEEEEECCCHHCCEEECCEEECHHHHHHCCCCCCEEHHCCCCE VALSRMEGIHTGDTLTIDADGKTKLPRVILLPPVFAMAIAPENRKDEVKMSSALTKLLEE EEEECCCCCCCCCEEEEECCCCCCCCEEEEECCHHHEEECCCCCHHHHHHHHHHHHHHHC DPALIWEQHGDTHEVIFWGQGEIHLQVSLERLHRKYNVSMKTYLPRVPYKETIRKKTTSH CCCEEEECCCCEEEEEEECCCEEEEEEEHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCC GRYKHQSGGHGQFGDVYLDIQPLPRGSGFNFSETVVGGVVPKQYISGVETGVREYLQQGP CCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC LGFPVVDVAVTLTNGSHHSVDSSEQAFKQAARVAMQQGMSDCQPVLLEPIALVDIFAPNE CCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCH FTSKVLQLISIRRGQILGYESMTDWERWDKTSAYLALSEMQDLIVELRSQTMGVGSFNWQ HHHHHHHHHHHHCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC FDHLQEVPNKLAEKVLIKNGNGNGRGHG HHHHHHHHHHHHHHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]