Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476365

Identifier: 113476365

GI number: 113476365

Start: 4294717

End: 4296081

Strand: Reverse

Name: 113476365

Synonym: Tery_2770

Alternate gene names: NA

Gene position: 4296081-4294717 (Counterclockwise)

Preceding gene: 113476366

Following gene: 113476364

Centisome position: 55.43

GC content: 33.99

Gene sequence:

>1365_bases
ATGGCTGATATTAAAATTTTACACTTAATTAATCGTCTTAGTTTAGGACCGACTCCTGGACAACTTGAAAAGATTAAAAA
TATTGGTGTAGAAAATTATATTCAATCTCAACTAGAACCTAATTCTATACCCTACCAAAAACTACTAATTCAAAAGCTAA
AATATCTAGATACATTACCCCTAACTCCTAGTGAAATAATCAAAGAATTACAACAACTTCAACAACAGGGAAAAGAATTA
AAATTAGATAGAATAGCATTAAATAGAATCAAACAACGTTTTGAGCAAAAGGTTTTTTTACAGGGGAGTAAAGGACGTTT
TTTAAGGAATCTAGAAAGTCCGCGTCATTTAGAGGAGGTGATGGTAGATTTTTGGTATAATCACTTTAATGTTTTTGGTC
GTCAAGGACTAAATCGTTTATATTTTAGCTGTTATGAACAGCAGGCAATTAGACCCTATGCTTTGGGAAAGTTTAGATTA
TTATTAGGCGCTACTGCTCATCATCCAGCTATGTTAATTTATTTAGATAATTGGCAAAGCCGTAGAGGTAGAATAAATGA
AAATTATGCTAGAGAATTATTAGAATTACATACTTTAGGTGTGGATGGAGGCTATAGTCAAGATGATGTTATGGCTTTAG
CAAAAATTTTGACTGGTTGGGGTCTACCTCCTAATAACAAAAGAGCAGAAGATAAAGATGGATTTTATTTTGATCAAAAA
CGTCACGAACCAGGAGATAAATTTTTTCTCGGACAAACAATTAAAGAGAATGGGATAGCTGAAGGTGAAACAGCTTTAGA
TATTTTGGCTAGTCATCCTTCAACGGCTAGATATATTAGTTATAAATTAGCTCAAACTTTTGTTTTAGACCAACCATCTG
AGTCTTTAGTAAAAGTTTTATCTCAGAGTTTTTTGGAGAGTGATGGGGATATTTCTCGGGTACTTAATACTCTGTTCAAT
AGTTCAGAGTTTTGGCAACCAGAGGTATATAATTCTAAGTTTAAAAATCCTTATCGGTTTGTAGTTTCTGCGATGAGAGC
TATTGGTAATGAGGTTGATAATTTTCGACCTATTAATGGGATTTTAGACCAGTTAGGAATGCCTATTTATGGTTGTATTA
CTCCTGATGGTTATAAAAATACAAAAGATGCTTGGTTAGATTCGGATACCATGATTCGACGGAGTAGTTTAGCTGTGCCT
TTATCTGGTGGTTTATTGGGTCGGGGTAAACCTATTAGTGCAGAAAAGTTAATGGGGACTTTGGGTAATAATTTTTCTGC
TCAGACTCGTGGGGTAATTGATCAAAGTCCTGGTGATTTAAGGGCGGCTTTAATTTTTGGTAGTCCTGAGTTTATGAGGT
ATTAA

Upstream 100 bases:

>100_bases
CTCAGTTTGGATTTAAGATTCTTTTGAAAAACAGTTTATAAATAATATAATAAATAATAATTCATAATTCATAATTTATA
ACTCATAATTCATAACTGAA

Downstream 100 bases:

>100_bases
AAGAATCGGAATTTAATGTTTTCAAAACCATTTTATGAGAAAAGTTTGACATCTTTTCCCGGTGCCAAATCTAACAAATA
TTCAAACTCTTCCATCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MADIKILHLINRLSLGPTPGQLEKIKNIGVENYIQSQLEPNSIPYQKLLIQKLKYLDTLPLTPSEIIKELQQLQQQGKEL
KLDRIALNRIKQRFEQKVFLQGSKGRFLRNLESPRHLEEVMVDFWYNHFNVFGRQGLNRLYFSCYEQQAIRPYALGKFRL
LLGATAHHPAMLIYLDNWQSRRGRINENYARELLELHTLGVDGGYSQDDVMALAKILTGWGLPPNNKRAEDKDGFYFDQK
RHEPGDKFFLGQTIKENGIAEGETALDILASHPSTARYISYKLAQTFVLDQPSESLVKVLSQSFLESDGDISRVLNTLFN
SSEFWQPEVYNSKFKNPYRFVVSAMRAIGNEVDNFRPINGILDQLGMPIYGCITPDGYKNTKDAWLDSDTMIRRSSLAVP
LSGGLLGRGKPISAEKLMGTLGNNFSAQTRGVIDQSPGDLRAALIFGSPEFMRY

Sequences:

>Translated_454_residues
MADIKILHLINRLSLGPTPGQLEKIKNIGVENYIQSQLEPNSIPYQKLLIQKLKYLDTLPLTPSEIIKELQQLQQQGKEL
KLDRIALNRIKQRFEQKVFLQGSKGRFLRNLESPRHLEEVMVDFWYNHFNVFGRQGLNRLYFSCYEQQAIRPYALGKFRL
LLGATAHHPAMLIYLDNWQSRRGRINENYARELLELHTLGVDGGYSQDDVMALAKILTGWGLPPNNKRAEDKDGFYFDQK
RHEPGDKFFLGQTIKENGIAEGETALDILASHPSTARYISYKLAQTFVLDQPSESLVKVLSQSFLESDGDISRVLNTLFN
SSEFWQPEVYNSKFKNPYRFVVSAMRAIGNEVDNFRPINGILDQLGMPIYGCITPDGYKNTKDAWLDSDTMIRRSSLAVP
LSGGLLGRGKPISAEKLMGTLGNNFSAQTRGVIDQSPGDLRAALIFGSPEFMRY
>Mature_453_residues
ADIKILHLINRLSLGPTPGQLEKIKNIGVENYIQSQLEPNSIPYQKLLIQKLKYLDTLPLTPSEIIKELQQLQQQGKELK
LDRIALNRIKQRFEQKVFLQGSKGRFLRNLESPRHLEEVMVDFWYNHFNVFGRQGLNRLYFSCYEQQAIRPYALGKFRLL
LGATAHHPAMLIYLDNWQSRRGRINENYARELLELHTLGVDGGYSQDDVMALAKILTGWGLPPNNKRAEDKDGFYFDQKR
HEPGDKFFLGQTIKENGIAEGETALDILASHPSTARYISYKLAQTFVLDQPSESLVKVLSQSFLESDGDISRVLNTLFNS
SEFWQPEVYNSKFKNPYRFVVSAMRAIGNEVDNFRPINGILDQLGMPIYGCITPDGYKNTKDAWLDSDTMIRRSSLAVPL
SGGLLGRGKPISAEKLMGTLGNNFSAQTRGVIDQSPGDLRAALIFGSPEFMRY

Specific function: Unknown

COG id: COG5267

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51628; Mature: 51497

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIKILHLINRLSLGPTPGQLEKIKNIGVENYIQSQLEPNSIPYQKLLIQKLKYLDTLP
CCCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
LTPSEIIKELQQLQQQGKELKLDRIALNRIKQRFEQKVFLQGSKGRFLRNLESPRHLEEV
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCCHHHHHHH
MVDFWYNHFNVFGRQGLNRLYFSCYEQQAIRPYALGKFRLLLGATAHHPAMLIYLDNWQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCC
RRGRINENYARELLELHTLGVDGGYSQDDVMALAKILTGWGLPPNNKRAEDKDGFYFDQK
CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCC
RHEPGDKFFLGQTIKENGIAEGETALDILASHPSTARYISYKLAQTFVLDQPSESLVKVL
CCCCCCCEEECCHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
SQSFLESDGDISRVLNTLFNSSEFWQPEVYNSKFKNPYRFVVSAMRAIGNEVDNFRPING
HHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHH
ILDQLGMPIYGCITPDGYKNTKDAWLDSDTMIRRSSLAVPLSGGLLGRGKPISAEKLMGT
HHHHCCCCEEEEECCCCCCCCCHHCCCCHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHH
LGNNFSAQTRGVIDQSPGDLRAALIFGSPEFMRY
HCCCCCCHHCCCCCCCCCCEEEEEEECCHHHHCC
>Mature Secondary Structure 
ADIKILHLINRLSLGPTPGQLEKIKNIGVENYIQSQLEPNSIPYQKLLIQKLKYLDTLP
CCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
LTPSEIIKELQQLQQQGKELKLDRIALNRIKQRFEQKVFLQGSKGRFLRNLESPRHLEEV
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCCHHHHHHH
MVDFWYNHFNVFGRQGLNRLYFSCYEQQAIRPYALGKFRLLLGATAHHPAMLIYLDNWQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCC
RRGRINENYARELLELHTLGVDGGYSQDDVMALAKILTGWGLPPNNKRAEDKDGFYFDQK
CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCC
RHEPGDKFFLGQTIKENGIAEGETALDILASHPSTARYISYKLAQTFVLDQPSESLVKVL
CCCCCCCEEECCHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
SQSFLESDGDISRVLNTLFNSSEFWQPEVYNSKFKNPYRFVVSAMRAIGNEVDNFRPING
HHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHH
ILDQLGMPIYGCITPDGYKNTKDAWLDSDTMIRRSSLAVPLSGGLLGRGKPISAEKLMGT
HHHHCCCCEEEEECCCCCCCCCHHCCCCHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHH
LGNNFSAQTRGVIDQSPGDLRAALIFGSPEFMRY
HCCCCCCHHCCCCCCCCCCEEEEEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA