| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113476299
Identifier: 113476299
GI number: 113476299
Start: 4173786
End: 4173998
Strand: Reverse
Name: 113476299
Synonym: Tery_2698
Alternate gene names: NA
Gene position: 4173998-4173786 (Counterclockwise)
Preceding gene: 113476300
Following gene: 113476298
Centisome position: 53.86
GC content: 37.56
Gene sequence:
>213_bases ATGGGTGAAGCAAAGCGTCGTAAAGAAGCACTTGGAGAAAATTATGCTCAAGAAGCAAGGTTTATTTCTTGGCTACCAAT TACTAAAAGTCAAAGTCAAAAATTTATGCAGTTGACTACAACTGGTGCATGGATAGGTATTGGACTCCTTGTTGTTGCCT GGTTAATAATTAGATTTATTGGCCCTGCTTTTGGATGGTGGCAAATTGAATAA
Upstream 100 bases:
>100_bases CATTTCTTCTGACTCCCTACCCCCGAAAAAGACGTTTTCAGTAAACCCTTACTACTGTTATGATTGGATATAAATTACTA AATAAAGGTTGAAATCATTT
Downstream 100 bases:
>100_bases ATTTAATTATTACTAATTATTACGCAATCAAAAAATCTTGACTTATTCTTTGTTAGTCGTATTAGTCATTCTCAAGGATA TTGATTGTATTAAATGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MGEAKRRKEALGENYAQEARFISWLPITKSQSQKFMQLTTTGAWIGIGLLVVAWLIIRFIGPAFGWWQIE
Sequences:
>Translated_70_residues MGEAKRRKEALGENYAQEARFISWLPITKSQSQKFMQLTTTGAWIGIGLLVVAWLIIRFIGPAFGWWQIE >Mature_69_residues GEAKRRKEALGENYAQEARFISWLPITKSQSQKFMQLTTTGAWIGIGLLVVAWLIIRFIGPAFGWWQIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8041; Mature: 7909
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEAKRRKEALGENYAQEARFISWLPITKSQSQKFMQLTTTGAWIGIGLLVVAWLIIRFI CCCHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH GPAFGWWQIE CCCCCEEECC >Mature Secondary Structure GEAKRRKEALGENYAQEARFISWLPITKSQSQKFMQLTTTGAWIGIGLLVVAWLIIRFI CCHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH GPAFGWWQIE CCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA