Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476298

Identifier: 113476298

GI number: 113476298

Start: 4172628

End: 4172993

Strand: Reverse

Name: 113476298

Synonym: Tery_2697

Alternate gene names: NA

Gene position: 4172993-4172628 (Counterclockwise)

Preceding gene: 113476299

Following gene: 113476297

Centisome position: 53.84

GC content: 38.8

Gene sequence:

>366_bases
GTGTTTCTGAGACTTACAGAACAACATCGTCAATTTATACAAGACCTAGTAATGAATTTACAAGCTCTAGCAACTGTGCT
AGAGAGGAGAGGATATTTGGCATCCTGTTACACTTGTGGAGGTCAAATGAATAGTGCATCATTTATGGTCAGCTTGGGAG
AAAACCATCAGATTCGCTTTCTCGTCTCAGATTATGGTATTACATGGACAGAGATGCGAGATGACCGTGAATTAATGAAA
TTAGAAGGAACTGAAGCTATTAGTCAGCTACAAGAACTAGCTAATTTGCTGAAAAATCAGATTCAGCCTTGTCAAAAACC
CAATAAACTCCAGCAAGCATATCTAAGCCTGAATAAGGGCATTTAG

Upstream 100 bases:

>100_bases
AAAAGCACAATAAACTAGAGATTATTGAGAATTGACCAGGGTTTATTGACAAAATTCGTTGGCTCTGAGAATCTAAGGAT
GTGATGATAGGAGGATAACT

Downstream 100 bases:

>100_bases
CATCAAGTTACCCTGCGTTAAACCTTATGGTTATAACGCAGATAATGTACTTGAAAGATGAAATACATTAATCTTTGCGA
CTAAAGACTGATCAAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MFLRLTEQHRQFIQDLVMNLQALATVLERRGYLASCYTCGGQMNSASFMVSLGENHQIRFLVSDYGITWTEMRDDRELMK
LEGTEAISQLQELANLLKNQIQPCQKPNKLQQAYLSLNKGI

Sequences:

>Translated_121_residues
MFLRLTEQHRQFIQDLVMNLQALATVLERRGYLASCYTCGGQMNSASFMVSLGENHQIRFLVSDYGITWTEMRDDRELMK
LEGTEAISQLQELANLLKNQIQPCQKPNKLQQAYLSLNKGI
>Mature_121_residues
MFLRLTEQHRQFIQDLVMNLQALATVLERRGYLASCYTCGGQMNSASFMVSLGENHQIRFLVSDYGITWTEMRDDRELMK
LEGTEAISQLQELANLLKNQIQPCQKPNKLQQAYLSLNKGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13928; Mature: 13928

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLRLTEQHRQFIQDLVMNLQALATVLERRGYLASCYTCGGQMNSASFMVSLGENHQIRF
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEEECCCCEEEE
LVSDYGITWTEMRDDRELMKLEGTEAISQLQELANLLKNQIQPCQKPNKLQQAYLSLNKG
EEECCCCCHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
I
C
>Mature Secondary Structure
MFLRLTEQHRQFIQDLVMNLQALATVLERRGYLASCYTCGGQMNSASFMVSLGENHQIRF
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEEECCCCEEEE
LVSDYGITWTEMRDDRELMKLEGTEAISQLQELANLLKNQIQPCQKPNKLQQAYLSLNKG
EEECCCCCHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA