The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476293

Identifier: 113476293

GI number: 113476293

Start: 4164431

End: 4165150

Strand: Reverse

Name: 113476293

Synonym: Tery_2692

Alternate gene names: NA

Gene position: 4165150-4164431 (Counterclockwise)

Preceding gene: 113476294

Following gene: 113476292

Centisome position: 53.74

GC content: 33.89

Gene sequence:

>720_bases
ATGCTTTATCCTTTCAATAAATTACAAAAACATCAATTTCCACAAGTGATCTTAGTACTATTTCTGCTAATTATTTTAGT
AGTAGGAACTTTGCCTGGTTATATAGCAGGAAAATGGTCATGGGAAAATACAGCCTCTATACCTTATTTAAAAAGTTTAA
GACAAATAAGAAAAGACGGATTAACTATTTCTGGTTTGCCAATAATATATCGTCAACAATTGATAATTTCTAATCATAAA
TGGTTACTGCAAAAAGTTAAAAATGATACTAGAGAAATAGTTTTTTTACTGTTAACTCCTAATGGACCAGAAGACAAGCC
TCAAGTAGAATGGATGGATATAAGTGGGCTTAATCGTTGGAAAATAGATTCCCAAAAGACTGTTAAATTTACTTTGAAAA
CAGTAGAAGATGATAATGGAACTACAGAGATAAAAAAACAATATCCTAATATAAAGGCTAGATTCTTTCGAGGTTGGACA
AGTGAACAAACTTATGCAATTATGCAGTGGTATGCTTGGCCTGGAGGAGGAAGTCCAGAACCTAGGGATTGGTTTTGGGC
TGATAGATTCGCTATGGCTTCTAAAAAGCGCATGCCTTGGGTAGCAGTAAGTATTATATTTCCTATCGAACCTCTAACAG
ATATAGATCCCTATCTCCCAGAGCTCATTTCTATTGGGCAAAAAACTCAAGCGTCACTGATAAAAAACGCATTCAAATAA

Upstream 100 bases:

>100_bases
ATTAAATTAGAAGTATTTATTTATTTATTTATTTCTTGATGAGATTTAATTTAACTAGATTTAATATCAAAATTATCACC
AAATATCAGAGGTTTTTATT

Downstream 100 bases:

>100_bases
TCCTTAAATATCAAAATTACAATTAGATTAAGTTACTCTAACTTTTCACATATCACATAGTTAAAATCAATGAATAGTTA
CTTATTGTAATAAGAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MLYPFNKLQKHQFPQVILVLFLLIILVVGTLPGYIAGKWSWENTASIPYLKSLRQIRKDGLTISGLPIIYRQQLIISNHK
WLLQKVKNDTREIVFLLLTPNGPEDKPQVEWMDISGLNRWKIDSQKTVKFTLKTVEDDNGTTEIKKQYPNIKARFFRGWT
SEQTYAIMQWYAWPGGGSPEPRDWFWADRFAMASKKRMPWVAVSIIFPIEPLTDIDPYLPELISIGQKTQASLIKNAFK

Sequences:

>Translated_239_residues
MLYPFNKLQKHQFPQVILVLFLLIILVVGTLPGYIAGKWSWENTASIPYLKSLRQIRKDGLTISGLPIIYRQQLIISNHK
WLLQKVKNDTREIVFLLLTPNGPEDKPQVEWMDISGLNRWKIDSQKTVKFTLKTVEDDNGTTEIKKQYPNIKARFFRGWT
SEQTYAIMQWYAWPGGGSPEPRDWFWADRFAMASKKRMPWVAVSIIFPIEPLTDIDPYLPELISIGQKTQASLIKNAFK
>Mature_239_residues
MLYPFNKLQKHQFPQVILVLFLLIILVVGTLPGYIAGKWSWENTASIPYLKSLRQIRKDGLTISGLPIIYRQQLIISNHK
WLLQKVKNDTREIVFLLLTPNGPEDKPQVEWMDISGLNRWKIDSQKTVKFTLKTVEDDNGTTEIKKQYPNIKARFFRGWT
SEQTYAIMQWYAWPGGGSPEPRDWFWADRFAMASKKRMPWVAVSIIFPIEPLTDIDPYLPELISIGQKTQASLIKNAFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27797; Mature: 27797

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYPFNKLQKHQFPQVILVLFLLIILVVGTLPGYIAGKWSWENTASIPYLKSLRQIRKDG
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHCC
LTISGLPIIYRQQLIISNHKWLLQKVKNDTREIVFLLLTPNGPEDKPQVEWMDISGLNRW
CEECCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEECCCCCEE
KIDSQKTVKFTLKTVEDDNGTTEIKKQYPNIKARFFRGWTSEQTYAIMQWYAWPGGGSPE
ECCCCCEEEEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCC
PRDWFWADRFAMASKKRMPWVAVSIIFPIEPLTDIDPYLPELISIGQKTQASLIKNAFK
CCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLYPFNKLQKHQFPQVILVLFLLIILVVGTLPGYIAGKWSWENTASIPYLKSLRQIRKDG
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHCC
LTISGLPIIYRQQLIISNHKWLLQKVKNDTREIVFLLLTPNGPEDKPQVEWMDISGLNRW
CEECCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEECCCCCEE
KIDSQKTVKFTLKTVEDDNGTTEIKKQYPNIKARFFRGWTSEQTYAIMQWYAWPGGGSPE
ECCCCCEEEEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCC
PRDWFWADRFAMASKKRMPWVAVSIIFPIEPLTDIDPYLPELISIGQKTQASLIKNAFK
CCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA