Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476294

Identifier: 113476294

GI number: 113476294

Start: 4165263

End: 4166156

Strand: Reverse

Name: 113476294

Synonym: Tery_2693

Alternate gene names: NA

Gene position: 4166156-4165263 (Counterclockwise)

Preceding gene: 113476295

Following gene: 113476293

Centisome position: 53.76

GC content: 32.89

Gene sequence:

>894_bases
ATGTCAACTCGTCAAAAATTTATTATTGCTCTTGAACAAAACTTACTGACAGTAGCGATCGCTGTCTTAATATTTTTGAT
GTATGCTCCTCTGATCATGTATTGGTACGATGGATGGCTAAATAAAAGTATTAGTGTAGAACATGAATATTTTAGTCATG
GAATAATAGGCTTACCTTTTGCTGGTTATATTGCTTGGACTAATAGGCAAAAATGGCAAAATTTAGCTAATGTTTTTCAT
CCCTTGGGAGCAGTATTATTAGGAATTGCAGGAGTTTGGTATATCAGTGCTATTCCAGACTTGATCAACTTATCTTTGAT
CATAATGTTGGTAGGAATTTGCCTTTGGTTTAAAGGAATGCCTGGATTGAAATTAATGGGTATGCCATTACTATTTATTT
TGCTTGCTAGTCCTAATAGTATTCCCTATTTAATTGAGCCTTATGCTTTACCTCTACAAAAGTTTATTGCTGGAATTGCT
GGGTTTATTTTGATTCAGTTGCAGATGAACGTTACTATTGATCAAATATATTTATATGTCGGTGGTAAAATTGTTGAGGT
TGCACCCCATTGTGTAGGTTTAAAAATGTTATTTACTAGTCTCTATTTTTCTTTAATGTTACTTTATTGGAATGGAGCGA
TAGGGAGTCGTATTCAGACTACTTTTTTACTGGTTAGTGCAGTATTACTTAGTGTCAGTGCAAATATTTTCAGAAATACT
GTACTAACAATTTTTCATGGTACAGGTCAGGATGAAGCTTTTCATTGGTTACATGATGGATGGGGTGGTGATATGTATTC
TGCTGGTATTTTGGTTTTATTAATTATAATTATGAAATGGGTAGATAATTATCTCATAAGCTCACTTGATTTTCCCAATA
AATCTGATATATAG

Upstream 100 bases:

>100_bases
AAGAATAAAGTCCTGATCTATAACTATCAAAATAATTACTAATTAAATCCTAAAGACAGATTTTGAACTTTTGAAATAGT
AAACAATAAAACTAAAAAAT

Downstream 100 bases:

>100_bases
ATAGGGTTATTTATTAAATTAGAAGTATTTATTTATTTATTTATTTCTTGATGAGATTTAATTTAACTAGATTTAATATC
AAAATTATCACCAAATATCA

Product: eight transmembrane protein EpsH

Products: NA

Alternate protein names: RND Family Efflux Transporter Subunit MFP; Eight Transmembrane Protein

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSTRQKFIIALEQNLLTVAIAVLIFLMYAPLIMYWYDGWLNKSISVEHEYFSHGIIGLPFAGYIAWTNRQKWQNLANVFH
PLGAVLLGIAGVWYISAIPDLINLSLIIMLVGICLWFKGMPGLKLMGMPLLFILLASPNSIPYLIEPYALPLQKFIAGIA
GFILIQLQMNVTIDQIYLYVGGKIVEVAPHCVGLKMLFTSLYFSLMLLYWNGAIGSRIQTTFLLVSAVLLSVSANIFRNT
VLTIFHGTGQDEAFHWLHDGWGGDMYSAGILVLLIIIMKWVDNYLISSLDFPNKSDI

Sequences:

>Translated_297_residues
MSTRQKFIIALEQNLLTVAIAVLIFLMYAPLIMYWYDGWLNKSISVEHEYFSHGIIGLPFAGYIAWTNRQKWQNLANVFH
PLGAVLLGIAGVWYISAIPDLINLSLIIMLVGICLWFKGMPGLKLMGMPLLFILLASPNSIPYLIEPYALPLQKFIAGIA
GFILIQLQMNVTIDQIYLYVGGKIVEVAPHCVGLKMLFTSLYFSLMLLYWNGAIGSRIQTTFLLVSAVLLSVSANIFRNT
VLTIFHGTGQDEAFHWLHDGWGGDMYSAGILVLLIIIMKWVDNYLISSLDFPNKSDI
>Mature_296_residues
STRQKFIIALEQNLLTVAIAVLIFLMYAPLIMYWYDGWLNKSISVEHEYFSHGIIGLPFAGYIAWTNRQKWQNLANVFHP
LGAVLLGIAGVWYISAIPDLINLSLIIMLVGICLWFKGMPGLKLMGMPLLFILLASPNSIPYLIEPYALPLQKFIAGIAG
FILIQLQMNVTIDQIYLYVGGKIVEVAPHCVGLKMLFTSLYFSLMLLYWNGAIGSRIQTTFLLVSAVLLSVSANIFRNTV
LTIFHGTGQDEAFHWLHDGWGGDMYSAGILVLLIIIMKWVDNYLISSLDFPNKSDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33340; Mature: 33209

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRQKFIIALEQNLLTVAIAVLIFLMYAPLIMYWYDGWLNKSISVEHEYFSHGIIGLPF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCCCCCC
AGYIAWTNRQKWQNLANVFHPLGAVLLGIAGVWYISAIPDLINLSLIIMLVGICLWFKGM
HHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGLKLMGMPLLFILLASPNSIPYLIEPYALPLQKFIAGIAGFILIQLQMNVTIDQIYLYV
CCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHC
GGKIVEVAPHCVGLKMLFTSLYFSLMLLYWNGAIGSRIQTTFLLVSAVLLSVSANIFRNT
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VLTIFHGTGQDEAFHWLHDGWGGDMYSAGILVLLIIIMKWVDNYLISSLDFPNKSDI
HEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
STRQKFIIALEQNLLTVAIAVLIFLMYAPLIMYWYDGWLNKSISVEHEYFSHGIIGLPF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCCCCCC
AGYIAWTNRQKWQNLANVFHPLGAVLLGIAGVWYISAIPDLINLSLIIMLVGICLWFKGM
HHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGLKLMGMPLLFILLASPNSIPYLIEPYALPLQKFIAGIAGFILIQLQMNVTIDQIYLYV
CCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHC
GGKIVEVAPHCVGLKMLFTSLYFSLMLLYWNGAIGSRIQTTFLLVSAVLLSVSANIFRNT
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VLTIFHGTGQDEAFHWLHDGWGGDMYSAGILVLLIIIMKWVDNYLISSLDFPNKSDI
HEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA