| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is plsC [H]
Identifier: 113476206
GI number: 113476206
Start: 4013957
End: 4014658
Strand: Reverse
Name: plsC [H]
Synonym: Tery_2597
Alternate gene names: 113476206
Gene position: 4014658-4013957 (Counterclockwise)
Preceding gene: 113476207
Following gene: 113476203
Centisome position: 51.8
GC content: 36.32
Gene sequence:
>702_bases ATGACTCAAGACAATAAACCTAAAAACTATTCAGCATCTCCAGAAATTATATCTGGATTTTCACCTTGGCTAACTCCCTT GAGTTACTTTATTACGTCTAAGATTCTTTTGCCCTTTTATTTCCAAATAGAAGTCAGGGGTCAAGAAAAAATTCCTATTG ATGAGGAGGCAATTATTCTGGCGCCGACTCATCGTTCTCGTTGGGATCCCCTAGTTATCGCTTATACCGTAAGTTTGGTT ACTAAACGTTACCTGCGATATATGGTTTCCCAAGAACAAGTAGAAGGTTTTCAAGGTTGGTTTATTCGTCGCTTGGGTGG TTTTCCCATTGATCGCGAGTCACCAGGAATATCTGCTCTTCGTCATAGTGTTAAAATCCTAAAAAATCAGGAAATTTTGG TATTATTTCCTGAAGGAAAAATATATCCTGAAGATAATGAAATTCATTTTATTCAACCAGGAGTTTCCCGTATAGCATTA CAGGTAATATCAAGTCGTGCTGAACTCAATCTTAAAATTGTTCCTATTAGTATTTTATACGATCATCCTGCACCACCACC CTGGCGATGTGGTGTACAGGTTAATATTGGTTCTCCTTTAGTAGTTAAAGATTATTTGGGTGATTCTACAAAGCAAGCTT CACAAGAACTTACTACTAATATAGAGCTTTCTCTAAAACAATTACACAAAAAAAGTTTTTGA
Upstream 100 bases:
>100_bases TATGAAACCTTTTCCTGTTCTATGAGTCAAGCTTTTTGTCCTGTTCTTAGGAGAGTAACAGTCTTTCTAGCCTTAACTTC TTCTTATTTTTATATTAGGA
Downstream 100 bases:
>100_bases AAGATCATAGATGTCGAGAAAAAAATATAATTGTAGTAAACTTTTATGTAGCATTTAAGGAATGTTTTTATATATAAAGT AAATAGTTATATTACTAATA
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; 1-acyl-G3P acyltransferase; Lysophosphatidic acid acyltransferase; LPAAT; Phosphatidic acid synthase; PA synthase [H]
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTQDNKPKNYSASPEIISGFSPWLTPLSYFITSKILLPFYFQIEVRGQEKIPIDEEAIILAPTHRSRWDPLVIAYTVSLV TKRYLRYMVSQEQVEGFQGWFIRRLGGFPIDRESPGISALRHSVKILKNQEILVLFPEGKIYPEDNEIHFIQPGVSRIAL QVISSRAELNLKIVPISILYDHPAPPPWRCGVQVNIGSPLVVKDYLGDSTKQASQELTTNIELSLKQLHKKSF
Sequences:
>Translated_233_residues MTQDNKPKNYSASPEIISGFSPWLTPLSYFITSKILLPFYFQIEVRGQEKIPIDEEAIILAPTHRSRWDPLVIAYTVSLV TKRYLRYMVSQEQVEGFQGWFIRRLGGFPIDRESPGISALRHSVKILKNQEILVLFPEGKIYPEDNEIHFIQPGVSRIAL QVISSRAELNLKIVPISILYDHPAPPPWRCGVQVNIGSPLVVKDYLGDSTKQASQELTTNIELSLKQLHKKSF >Mature_232_residues TQDNKPKNYSASPEIISGFSPWLTPLSYFITSKILLPFYFQIEVRGQEKIPIDEEAIILAPTHRSRWDPLVIAYTVSLVT KRYLRYMVSQEQVEGFQGWFIRRLGGFPIDRESPGISALRHSVKILKNQEILVLFPEGKIYPEDNEIHFIQPGVSRIALQ VISSRAELNLKIVPISILYDHPAPPPWRCGVQVNIGSPLVVKDYLGDSTKQASQELTTNIELSLKQLHKKSF
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid (PA) by incorporating an acyl moiety at the 2 position. This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: NA
Molecular weight: Translated: 26572; Mature: 26441
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDNKPKNYSASPEIISGFSPWLTPLSYFITSKILLPFYFQIEVRGQEKIPIDEEAIIL CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCEEEE APTHRSRWDPLVIAYTVSLVTKRYLRYMVSQEQVEGFQGWFIRRLGGFPIDRESPGISAL ECCCCCCCCCEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH RHSVKILKNQEILVLFPEGKIYPEDNEIHFIQPGVSRIALQVISSRAELNLKIVPISILY HHHHHHHCCCCEEEEECCCEECCCCCCEEEECCCHHHHHHHHHHHHHHEEEEEEEEEEEE DHPAPPPWRCGVQVNIGSPLVVKDYLGDSTKQASQELTTNIELSLKQLHKKSF CCCCCCCCCCCEEEECCCCEEEHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure TQDNKPKNYSASPEIISGFSPWLTPLSYFITSKILLPFYFQIEVRGQEKIPIDEEAIIL CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCEEEE APTHRSRWDPLVIAYTVSLVTKRYLRYMVSQEQVEGFQGWFIRRLGGFPIDRESPGISAL ECCCCCCCCCEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH RHSVKILKNQEILVLFPEGKIYPEDNEIHFIQPGVSRIALQVISSRAELNLKIVPISILY HHHHHHHCCCCEEEEECCCEECCCCCCEEEECCCHHHHHHHHHHHHHHEEEEEEEEEEEE DHPAPPPWRCGVQVNIGSPLVVKDYLGDSTKQASQELTTNIELSLKQLHKKSF CCCCCCCCCCCEEEECCCCEEEHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11544234 [H]