Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476203

Identifier: 113476203

GI number: 113476203

Start: 4008444

End: 4008809

Strand: Reverse

Name: 113476203

Synonym: Tery_2594

Alternate gene names: NA

Gene position: 4008809-4008444 (Counterclockwise)

Preceding gene: 113476206

Following gene: 113476198

Centisome position: 51.73

GC content: 27.6

Gene sequence:

>366_bases
TTGGCAAGAAGCCAAATTTTGCAGCAACTTAATCATCCTATAGTTCCCAAAGTAGTATCAGATGGATATTTTATTTGGGA
TGTTAAAACTAACATTTATCACTTCTTAATTATAGAAAAAATAGCAAGAGATAATTTAATAACTTGGATGTCAAAAACAG
GGAAAATTTTTATTAGTGAAGAGTTAGTAATAAATTGGTTAAAACAATTATTAGAAATTCTAGATTATTTGCACAACCAG
AATTATATTCACCGGGATATTAAACCTACTAATATTATAGTCAAAGCAAATCTAGATTTAGTGCCAATTGATTTTGGTAC
TGCGAGGAAAATTAACTATACTTATTTTTTTTGCCAAACGAAATGA

Upstream 100 bases:

>100_bases
GTAGCTGTGGTGAAGTATGGGAAGTGGAAGAAAGAGGTACGAGAAAAAAAGTGATTAAAGTGATAGGTAGTTTTTGTGAA
GAAAAACAGATCTGTCTATT

Downstream 100 bases:

>100_bases
TAATCAACTAACAAAAGTTGCTACATATTATGCACCTCTAGAACAAATTAAGGGAAAGGTTATACCTCAATCAGAATTTT
TTGGCTTTGGGGCGTACTGG

Product: Ser/thr protein kinase

Products: NA

Alternate protein names: Serine/Threonine Kinase; TPR Repeat-Containing Serine/Threonin Protein Kinase; Protein Kinase; Protein Kinase Domain; Ser/Thr Protein Kinase; WD-40 Repeat-Containing Serine/Threonin Protein Kinase; Tetratricopeptide Repeat Domain Protein; Serine/Threonine Sensor; RIO1 Family; WD40 Repeat-Containing Serine/Threonine Protein Kinase; WD-40 Repeat-Containing Protein

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MARSQILQQLNHPIVPKVVSDGYFIWDVKTNIYHFLIIEKIARDNLITWMSKTGKIFISEELVINWLKQLLEILDYLHNQ
NYIHRDIKPTNIIVKANLDLVPIDFGTARKINYTYFFCQTK

Sequences:

>Translated_121_residues
MARSQILQQLNHPIVPKVVSDGYFIWDVKTNIYHFLIIEKIARDNLITWMSKTGKIFISEELVINWLKQLLEILDYLHNQ
NYIHRDIKPTNIIVKANLDLVPIDFGTARKINYTYFFCQTK
>Mature_120_residues
ARSQILQQLNHPIVPKVVSDGYFIWDVKTNIYHFLIIEKIARDNLITWMSKTGKIFISEELVINWLKQLLEILDYLHNQN
YIHRDIKPTNIIVKANLDLVPIDFGTARKINYTYFFCQTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14366; Mature: 14235

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00108 PROTEIN_KINASE_ST ; PS50011 PROTEIN_KINASE_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSQILQQLNHPIVPKVVSDGYFIWDVKTNIYHFLIIEKIARDNLITWMSKTGKIFISE
CCHHHHHHHHCCCCCCEEECCCEEEEEECCCEEEHHHHHHHHHCCCEEEECCCCEEEEEH
ELVINWLKQLLEILDYLHNQNYIHRDIKPTNIIVKANLDLVPIDFGTARKINYTYFFCQT
HHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCEEEECCCCCEEEEEEEEEEEC
K
C
>Mature Secondary Structure 
ARSQILQQLNHPIVPKVVSDGYFIWDVKTNIYHFLIIEKIARDNLITWMSKTGKIFISE
CHHHHHHHHCCCCCCEEECCCEEEEEECCCEEEHHHHHHHHHCCCEEEECCCCEEEEEH
ELVINWLKQLLEILDYLHNQNYIHRDIKPTNIIVKANLDLVPIDFGTARKINYTYFFCQT
HHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCEEEECCCCCEEEEEEEEEEEC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA