| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476191
Identifier: 113476191
GI number: 113476191
Start: 3980136
End: 3982016
Strand: Reverse
Name: 113476191
Synonym: Tery_2582
Alternate gene names: NA
Gene position: 3982016-3980136 (Counterclockwise)
Preceding gene: 113476194
Following gene: 113476190
Centisome position: 51.38
GC content: 35.14
Gene sequence:
>1881_bases GTGAATCCAATATTTATAATTTCTTCATCAGAAAATAATCACACAAATTTATTACATAAAACCAGTTATTTATCAATCCT TTTAGCTACAGTATTACTAGGGTTATTTGCGTCTACAAGTTTGGCAGTACCACCCATAAAAGAAGTAGCCCAAGTCCCAG AAAATCAAGCTAATTCTGAGATGAAAGTGCTTTATGTTAGTTCATCAATTGGCAGAGACTACAGAGATGGAACTAAAACT ACTCCTTTGAAAACTATTACTTATGCTTTAAAAATTGCTCAACCTAATACAACAATTTTACTTGCTCCTGGAACTTATAG CAGACAAACAGGTGAAGTTTTCCCTTTAATTTTAAAGCCAAAAGTCACAATAAAAGGCAACTTCTTCAACAGAGGTAAAA ATGTTTTAATTATAGGTGGTGGTAATTTTAATAGTTCGACTATAAAACAAAAAAATATTACAATCATAGCAGCTAAAAAC TCAAAGTTAAATGGTGTAACAGTCACAAATCCTAATCTTCAAGGTTATGGTTTATGGATCGAATCTAGTGACTTTATTAT TAGTAAAAATACTTTTACTGGTAATCGTATGAATGGAATTTCTATAGTGGGTAATAATATAGGAATGATTCAGGAAAATA CTTTCTATAACAACGGCAGAAATGGTATAAAAATTTCTGATAATTCTCAACCAGAAATTAGAAATAATTTGTTTCAAAAC ACAGCTGTGGGCATTAAAATTTCAGATAATGCTGCTCCAAAAGTAATAGGAAACCGTTTAATTGAAAATCAAAATGGAAT AATTATCCAAGGAAATGCACAGCCAATTTTGCGAGGCAATTATATAGAGAATAATAGACAGAATGGAGTAGCAGCCACCG CTCGATCACTACCGGATCTAGGTAATTCTCAAGAGCCTGGTCGTAATACTATTCGTAATAATGGTCAGTATAATATTTAT TCTGTAGTTAAAGGTAAAATTATTCCTGCTTATGGAAATTCTTTAGAAGGCGATCGTAATTATGGTAGCATCGATATAGC GGGAAAAATTGCCCCACCTCCACGAGTTGCTCCTGTGAAAAATACTCCAACAACCCCAAATGTAGATCAAGTACAAAGAG AGTCGAAAAAGGAGGCAGTAGTTATGGAAACTGCACCTCTAAGACAAGACATTCAGGTAAAGACAAAAGAATCAAATTTT TCACCCTCAGCAGAAAAACCACCGGAGCAAAGCATATCTAGTAATATTGTTTCCCGAGCCAGAACACAAAATTCAACCAG AGAAATAGTTATCATCCCTGTACCACTTCCAGAAACTCAGAAAACATCTAGGACAAATTCCTACGAACAACCTAATGGTC AGAGAAATTTACAAAGACTGCTAGAAACTAATCCTAATTACTATAATAGACAAACAATTAAAATACCAGTATCGCCACCA GAGTCAGGAAGAAGAGCATTAGAAGCCTTGTCGAATTTACCACCAAGAAGCACTCCCCCAACTTATGGAAGTAAGACACC AGTTGCTGCTCCTAGTGTATTACCTGTTCCCACAGCAAATATTCCTCTTGGTCGTGGAGGTTATGTACCACCCGGTATAG CACAAAATAAAAATCCATTACCTCTTTCTAGGCTATCTTTAAGGTCTAATTCTCAAAATCATGCAGTAGCTTTAGGTCTA CGCTATCGGGTAGTGGTAAGTGTGAATAATATTTCTCAGCAATATAAGCTGCGATCGCTCGTACCAGATGCTTTTTCCAC TAAAATTAATGGTAATTCTATAATGCAAGCAGGAGCTTTTAAGAGTCGCTTTCAAGCGAATAAATTATTAAGAACTTTGC AGAACAATGGGTTGAATGCTCAAATTCTACCCGTGCAATAA
Upstream 100 bases:
>100_bases AACAATTAAATCATTTTGAAAAAAAATCAAAATCTTTGTTCAAAACATCCCATTATAAAATATAACTAATTTTCTGTCAT AGTTTCCCAGGAGAAAAGCT
Downstream 100 bases:
>100_bases GATTAAGATATAGATAAAAATCAAAAGGCGCAAAGCAGCGAAATTAAATTCCCTGCAAAGGACTATAGCTGAAGTCAGAA GTCATCAGAAGTCATCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MNPIFIISSSENNHTNLLHKTSYLSILLATVLLGLFASTSLAVPPIKEVAQVPENQANSEMKVLYVSSSIGRDYRDGTKT TPLKTITYALKIAQPNTTILLAPGTYSRQTGEVFPLILKPKVTIKGNFFNRGKNVLIIGGGNFNSSTIKQKNITIIAAKN SKLNGVTVTNPNLQGYGLWIESSDFIISKNTFTGNRMNGISIVGNNIGMIQENTFYNNGRNGIKISDNSQPEIRNNLFQN TAVGIKISDNAAPKVIGNRLIENQNGIIIQGNAQPILRGNYIENNRQNGVAATARSLPDLGNSQEPGRNTIRNNGQYNIY SVVKGKIIPAYGNSLEGDRNYGSIDIAGKIAPPPRVAPVKNTPTTPNVDQVQRESKKEAVVMETAPLRQDIQVKTKESNF SPSAEKPPEQSISSNIVSRARTQNSTREIVIIPVPLPETQKTSRTNSYEQPNGQRNLQRLLETNPNYYNRQTIKIPVSPP ESGRRALEALSNLPPRSTPPTYGSKTPVAAPSVLPVPTANIPLGRGGYVPPGIAQNKNPLPLSRLSLRSNSQNHAVALGL RYRVVVSVNNISQQYKLRSLVPDAFSTKINGNSIMQAGAFKSRFQANKLLRTLQNNGLNAQILPVQ
Sequences:
>Translated_626_residues MNPIFIISSSENNHTNLLHKTSYLSILLATVLLGLFASTSLAVPPIKEVAQVPENQANSEMKVLYVSSSIGRDYRDGTKT TPLKTITYALKIAQPNTTILLAPGTYSRQTGEVFPLILKPKVTIKGNFFNRGKNVLIIGGGNFNSSTIKQKNITIIAAKN SKLNGVTVTNPNLQGYGLWIESSDFIISKNTFTGNRMNGISIVGNNIGMIQENTFYNNGRNGIKISDNSQPEIRNNLFQN TAVGIKISDNAAPKVIGNRLIENQNGIIIQGNAQPILRGNYIENNRQNGVAATARSLPDLGNSQEPGRNTIRNNGQYNIY SVVKGKIIPAYGNSLEGDRNYGSIDIAGKIAPPPRVAPVKNTPTTPNVDQVQRESKKEAVVMETAPLRQDIQVKTKESNF SPSAEKPPEQSISSNIVSRARTQNSTREIVIIPVPLPETQKTSRTNSYEQPNGQRNLQRLLETNPNYYNRQTIKIPVSPP ESGRRALEALSNLPPRSTPPTYGSKTPVAAPSVLPVPTANIPLGRGGYVPPGIAQNKNPLPLSRLSLRSNSQNHAVALGL RYRVVVSVNNISQQYKLRSLVPDAFSTKINGNSIMQAGAFKSRFQANKLLRTLQNNGLNAQILPVQ >Mature_626_residues MNPIFIISSSENNHTNLLHKTSYLSILLATVLLGLFASTSLAVPPIKEVAQVPENQANSEMKVLYVSSSIGRDYRDGTKT TPLKTITYALKIAQPNTTILLAPGTYSRQTGEVFPLILKPKVTIKGNFFNRGKNVLIIGGGNFNSSTIKQKNITIIAAKN SKLNGVTVTNPNLQGYGLWIESSDFIISKNTFTGNRMNGISIVGNNIGMIQENTFYNNGRNGIKISDNSQPEIRNNLFQN TAVGIKISDNAAPKVIGNRLIENQNGIIIQGNAQPILRGNYIENNRQNGVAATARSLPDLGNSQEPGRNTIRNNGQYNIY SVVKGKIIPAYGNSLEGDRNYGSIDIAGKIAPPPRVAPVKNTPTTPNVDQVQRESKKEAVVMETAPLRQDIQVKTKESNF SPSAEKPPEQSISSNIVSRARTQNSTREIVIIPVPLPETQKTSRTNSYEQPNGQRNLQRLLETNPNYYNRQTIKIPVSPP ESGRRALEALSNLPPRSTPPTYGSKTPVAAPSVLPVPTANIPLGRGGYVPPGIAQNKNPLPLSRLSLRSNSQNHAVALGL RYRVVVSVNNISQQYKLRSLVPDAFSTKINGNSIMQAGAFKSRFQANKLLRTLQNNGLNAQILPVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68248; Mature: 68248
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPIFIISSSENNHTNLLHKTSYLSILLATVLLGLFASTSLAVPPIKEVAQVPENQANSE CCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCC MKVLYVSSSIGRDYRDGTKTTPLKTITYALKIAQPNTTILLAPGTYSRQTGEVFPLILKP EEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCEEEEEECC KVTIKGNFFNRGKNVLIIGGGNFNSSTIKQKNITIIAAKNSKLNGVTVTNPNLQGYGLWI EEEEECCCCCCCCEEEEEECCCCCCCEEEECCEEEEEECCCCCCCEEEECCCCCEEEEEE ESSDFIISKNTFTGNRMNGISIVGNNIGMIQENTFYNNGRNGIKISDNSQPEIRNNLFQN ECCCEEEECCCCCCCCCCCEEEEECCCCEEECCCEECCCCCCEEECCCCCCHHHHHHHHC TAVGIKISDNAAPKVIGNRLIENQNGIIIQGNAQPILRGNYIENNRQNGVAATARSLPDL CEEEEEECCCCCHHHHHHHHEECCCCEEEECCCCCEEECCEECCCCCCCHHHHHHHCCCC GNSQEPGRNTIRNNGQYNIYSVVKGKIIPAYGNSLEGDRNYGSIDIAGKIAPPPRVAPVK CCCCCCCCHHHHCCCCEEEEEEEECEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCC NTPTTPNVDQVQRESKKEAVVMETAPLRQDIQVKTKESNFSPSAEKPPEQSISSNIVSRA CCCCCCCHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH RTQNSTREIVIIPVPLPETQKTSRTNSYEQPNGQRNLQRLLETNPNYYNRQTIKIPVSPP HCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCC ESGRRALEALSNLPPRSTPPTYGSKTPVAAPSVLPVPTANIPLGRGGYVPPGIAQNKNPL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLSRLSLRSNSQNHAVALGLRYRVVVSVNNISQQYKLRSLVPDAFSTKINGNSIMQAGAF CHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHCCHHHHEEECCCCEEECCHH KSRFQANKLLRTLQNNGLNAQILPVQ HHHHHHHHHHHHHHCCCCCEEEEECC >Mature Secondary Structure MNPIFIISSSENNHTNLLHKTSYLSILLATVLLGLFASTSLAVPPIKEVAQVPENQANSE CCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCC MKVLYVSSSIGRDYRDGTKTTPLKTITYALKIAQPNTTILLAPGTYSRQTGEVFPLILKP EEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCEEEEEECC KVTIKGNFFNRGKNVLIIGGGNFNSSTIKQKNITIIAAKNSKLNGVTVTNPNLQGYGLWI EEEEECCCCCCCCEEEEEECCCCCCCEEEECCEEEEEECCCCCCCEEEECCCCCEEEEEE ESSDFIISKNTFTGNRMNGISIVGNNIGMIQENTFYNNGRNGIKISDNSQPEIRNNLFQN ECCCEEEECCCCCCCCCCCEEEEECCCCEEECCCEECCCCCCEEECCCCCCHHHHHHHHC TAVGIKISDNAAPKVIGNRLIENQNGIIIQGNAQPILRGNYIENNRQNGVAATARSLPDL CEEEEEECCCCCHHHHHHHHEECCCCEEEECCCCCEEECCEECCCCCCCHHHHHHHCCCC GNSQEPGRNTIRNNGQYNIYSVVKGKIIPAYGNSLEGDRNYGSIDIAGKIAPPPRVAPVK CCCCCCCCHHHHCCCCEEEEEEEECEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCC NTPTTPNVDQVQRESKKEAVVMETAPLRQDIQVKTKESNFSPSAEKPPEQSISSNIVSRA CCCCCCCHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH RTQNSTREIVIIPVPLPETQKTSRTNSYEQPNGQRNLQRLLETNPNYYNRQTIKIPVSPP HCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCC ESGRRALEALSNLPPRSTPPTYGSKTPVAAPSVLPVPTANIPLGRGGYVPPGIAQNKNPL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLSRLSLRSNSQNHAVALGLRYRVVVSVNNISQQYKLRSLVPDAFSTKINGNSIMQAGAF CHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHCCHHHHEEECCCCEEECCHH KSRFQANKLLRTLQNNGLNAQILPVQ HHHHHHHHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA