The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113476191

Identifier: 113476191

GI number: 113476191

Start: 3980136

End: 3982016

Strand: Reverse

Name: 113476191

Synonym: Tery_2582

Alternate gene names: NA

Gene position: 3982016-3980136 (Counterclockwise)

Preceding gene: 113476194

Following gene: 113476190

Centisome position: 51.38

GC content: 35.14

Gene sequence:

>1881_bases
GTGAATCCAATATTTATAATTTCTTCATCAGAAAATAATCACACAAATTTATTACATAAAACCAGTTATTTATCAATCCT
TTTAGCTACAGTATTACTAGGGTTATTTGCGTCTACAAGTTTGGCAGTACCACCCATAAAAGAAGTAGCCCAAGTCCCAG
AAAATCAAGCTAATTCTGAGATGAAAGTGCTTTATGTTAGTTCATCAATTGGCAGAGACTACAGAGATGGAACTAAAACT
ACTCCTTTGAAAACTATTACTTATGCTTTAAAAATTGCTCAACCTAATACAACAATTTTACTTGCTCCTGGAACTTATAG
CAGACAAACAGGTGAAGTTTTCCCTTTAATTTTAAAGCCAAAAGTCACAATAAAAGGCAACTTCTTCAACAGAGGTAAAA
ATGTTTTAATTATAGGTGGTGGTAATTTTAATAGTTCGACTATAAAACAAAAAAATATTACAATCATAGCAGCTAAAAAC
TCAAAGTTAAATGGTGTAACAGTCACAAATCCTAATCTTCAAGGTTATGGTTTATGGATCGAATCTAGTGACTTTATTAT
TAGTAAAAATACTTTTACTGGTAATCGTATGAATGGAATTTCTATAGTGGGTAATAATATAGGAATGATTCAGGAAAATA
CTTTCTATAACAACGGCAGAAATGGTATAAAAATTTCTGATAATTCTCAACCAGAAATTAGAAATAATTTGTTTCAAAAC
ACAGCTGTGGGCATTAAAATTTCAGATAATGCTGCTCCAAAAGTAATAGGAAACCGTTTAATTGAAAATCAAAATGGAAT
AATTATCCAAGGAAATGCACAGCCAATTTTGCGAGGCAATTATATAGAGAATAATAGACAGAATGGAGTAGCAGCCACCG
CTCGATCACTACCGGATCTAGGTAATTCTCAAGAGCCTGGTCGTAATACTATTCGTAATAATGGTCAGTATAATATTTAT
TCTGTAGTTAAAGGTAAAATTATTCCTGCTTATGGAAATTCTTTAGAAGGCGATCGTAATTATGGTAGCATCGATATAGC
GGGAAAAATTGCCCCACCTCCACGAGTTGCTCCTGTGAAAAATACTCCAACAACCCCAAATGTAGATCAAGTACAAAGAG
AGTCGAAAAAGGAGGCAGTAGTTATGGAAACTGCACCTCTAAGACAAGACATTCAGGTAAAGACAAAAGAATCAAATTTT
TCACCCTCAGCAGAAAAACCACCGGAGCAAAGCATATCTAGTAATATTGTTTCCCGAGCCAGAACACAAAATTCAACCAG
AGAAATAGTTATCATCCCTGTACCACTTCCAGAAACTCAGAAAACATCTAGGACAAATTCCTACGAACAACCTAATGGTC
AGAGAAATTTACAAAGACTGCTAGAAACTAATCCTAATTACTATAATAGACAAACAATTAAAATACCAGTATCGCCACCA
GAGTCAGGAAGAAGAGCATTAGAAGCCTTGTCGAATTTACCACCAAGAAGCACTCCCCCAACTTATGGAAGTAAGACACC
AGTTGCTGCTCCTAGTGTATTACCTGTTCCCACAGCAAATATTCCTCTTGGTCGTGGAGGTTATGTACCACCCGGTATAG
CACAAAATAAAAATCCATTACCTCTTTCTAGGCTATCTTTAAGGTCTAATTCTCAAAATCATGCAGTAGCTTTAGGTCTA
CGCTATCGGGTAGTGGTAAGTGTGAATAATATTTCTCAGCAATATAAGCTGCGATCGCTCGTACCAGATGCTTTTTCCAC
TAAAATTAATGGTAATTCTATAATGCAAGCAGGAGCTTTTAAGAGTCGCTTTCAAGCGAATAAATTATTAAGAACTTTGC
AGAACAATGGGTTGAATGCTCAAATTCTACCCGTGCAATAA

Upstream 100 bases:

>100_bases
AACAATTAAATCATTTTGAAAAAAAATCAAAATCTTTGTTCAAAACATCCCATTATAAAATATAACTAATTTTCTGTCAT
AGTTTCCCAGGAGAAAAGCT

Downstream 100 bases:

>100_bases
GATTAAGATATAGATAAAAATCAAAAGGCGCAAAGCAGCGAAATTAAATTCCCTGCAAAGGACTATAGCTGAAGTCAGAA
GTCATCAGAAGTCATCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MNPIFIISSSENNHTNLLHKTSYLSILLATVLLGLFASTSLAVPPIKEVAQVPENQANSEMKVLYVSSSIGRDYRDGTKT
TPLKTITYALKIAQPNTTILLAPGTYSRQTGEVFPLILKPKVTIKGNFFNRGKNVLIIGGGNFNSSTIKQKNITIIAAKN
SKLNGVTVTNPNLQGYGLWIESSDFIISKNTFTGNRMNGISIVGNNIGMIQENTFYNNGRNGIKISDNSQPEIRNNLFQN
TAVGIKISDNAAPKVIGNRLIENQNGIIIQGNAQPILRGNYIENNRQNGVAATARSLPDLGNSQEPGRNTIRNNGQYNIY
SVVKGKIIPAYGNSLEGDRNYGSIDIAGKIAPPPRVAPVKNTPTTPNVDQVQRESKKEAVVMETAPLRQDIQVKTKESNF
SPSAEKPPEQSISSNIVSRARTQNSTREIVIIPVPLPETQKTSRTNSYEQPNGQRNLQRLLETNPNYYNRQTIKIPVSPP
ESGRRALEALSNLPPRSTPPTYGSKTPVAAPSVLPVPTANIPLGRGGYVPPGIAQNKNPLPLSRLSLRSNSQNHAVALGL
RYRVVVSVNNISQQYKLRSLVPDAFSTKINGNSIMQAGAFKSRFQANKLLRTLQNNGLNAQILPVQ

Sequences:

>Translated_626_residues
MNPIFIISSSENNHTNLLHKTSYLSILLATVLLGLFASTSLAVPPIKEVAQVPENQANSEMKVLYVSSSIGRDYRDGTKT
TPLKTITYALKIAQPNTTILLAPGTYSRQTGEVFPLILKPKVTIKGNFFNRGKNVLIIGGGNFNSSTIKQKNITIIAAKN
SKLNGVTVTNPNLQGYGLWIESSDFIISKNTFTGNRMNGISIVGNNIGMIQENTFYNNGRNGIKISDNSQPEIRNNLFQN
TAVGIKISDNAAPKVIGNRLIENQNGIIIQGNAQPILRGNYIENNRQNGVAATARSLPDLGNSQEPGRNTIRNNGQYNIY
SVVKGKIIPAYGNSLEGDRNYGSIDIAGKIAPPPRVAPVKNTPTTPNVDQVQRESKKEAVVMETAPLRQDIQVKTKESNF
SPSAEKPPEQSISSNIVSRARTQNSTREIVIIPVPLPETQKTSRTNSYEQPNGQRNLQRLLETNPNYYNRQTIKIPVSPP
ESGRRALEALSNLPPRSTPPTYGSKTPVAAPSVLPVPTANIPLGRGGYVPPGIAQNKNPLPLSRLSLRSNSQNHAVALGL
RYRVVVSVNNISQQYKLRSLVPDAFSTKINGNSIMQAGAFKSRFQANKLLRTLQNNGLNAQILPVQ
>Mature_626_residues
MNPIFIISSSENNHTNLLHKTSYLSILLATVLLGLFASTSLAVPPIKEVAQVPENQANSEMKVLYVSSSIGRDYRDGTKT
TPLKTITYALKIAQPNTTILLAPGTYSRQTGEVFPLILKPKVTIKGNFFNRGKNVLIIGGGNFNSSTIKQKNITIIAAKN
SKLNGVTVTNPNLQGYGLWIESSDFIISKNTFTGNRMNGISIVGNNIGMIQENTFYNNGRNGIKISDNSQPEIRNNLFQN
TAVGIKISDNAAPKVIGNRLIENQNGIIIQGNAQPILRGNYIENNRQNGVAATARSLPDLGNSQEPGRNTIRNNGQYNIY
SVVKGKIIPAYGNSLEGDRNYGSIDIAGKIAPPPRVAPVKNTPTTPNVDQVQRESKKEAVVMETAPLRQDIQVKTKESNF
SPSAEKPPEQSISSNIVSRARTQNSTREIVIIPVPLPETQKTSRTNSYEQPNGQRNLQRLLETNPNYYNRQTIKIPVSPP
ESGRRALEALSNLPPRSTPPTYGSKTPVAAPSVLPVPTANIPLGRGGYVPPGIAQNKNPLPLSRLSLRSNSQNHAVALGL
RYRVVVSVNNISQQYKLRSLVPDAFSTKINGNSIMQAGAFKSRFQANKLLRTLQNNGLNAQILPVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68248; Mature: 68248

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPIFIISSSENNHTNLLHKTSYLSILLATVLLGLFASTSLAVPPIKEVAQVPENQANSE
CCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCC
MKVLYVSSSIGRDYRDGTKTTPLKTITYALKIAQPNTTILLAPGTYSRQTGEVFPLILKP
EEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCEEEEEECC
KVTIKGNFFNRGKNVLIIGGGNFNSSTIKQKNITIIAAKNSKLNGVTVTNPNLQGYGLWI
EEEEECCCCCCCCEEEEEECCCCCCCEEEECCEEEEEECCCCCCCEEEECCCCCEEEEEE
ESSDFIISKNTFTGNRMNGISIVGNNIGMIQENTFYNNGRNGIKISDNSQPEIRNNLFQN
ECCCEEEECCCCCCCCCCCEEEEECCCCEEECCCEECCCCCCEEECCCCCCHHHHHHHHC
TAVGIKISDNAAPKVIGNRLIENQNGIIIQGNAQPILRGNYIENNRQNGVAATARSLPDL
CEEEEEECCCCCHHHHHHHHEECCCCEEEECCCCCEEECCEECCCCCCCHHHHHHHCCCC
GNSQEPGRNTIRNNGQYNIYSVVKGKIIPAYGNSLEGDRNYGSIDIAGKIAPPPRVAPVK
CCCCCCCCHHHHCCCCEEEEEEEECEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
NTPTTPNVDQVQRESKKEAVVMETAPLRQDIQVKTKESNFSPSAEKPPEQSISSNIVSRA
CCCCCCCHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
RTQNSTREIVIIPVPLPETQKTSRTNSYEQPNGQRNLQRLLETNPNYYNRQTIKIPVSPP
HCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCC
ESGRRALEALSNLPPRSTPPTYGSKTPVAAPSVLPVPTANIPLGRGGYVPPGIAQNKNPL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLSRLSLRSNSQNHAVALGLRYRVVVSVNNISQQYKLRSLVPDAFSTKINGNSIMQAGAF
CHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHCCHHHHEEECCCCEEECCHH
KSRFQANKLLRTLQNNGLNAQILPVQ
HHHHHHHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure
MNPIFIISSSENNHTNLLHKTSYLSILLATVLLGLFASTSLAVPPIKEVAQVPENQANSE
CCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCC
MKVLYVSSSIGRDYRDGTKTTPLKTITYALKIAQPNTTILLAPGTYSRQTGEVFPLILKP
EEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCEEEEEECC
KVTIKGNFFNRGKNVLIIGGGNFNSSTIKQKNITIIAAKNSKLNGVTVTNPNLQGYGLWI
EEEEECCCCCCCCEEEEEECCCCCCCEEEECCEEEEEECCCCCCCEEEECCCCCEEEEEE
ESSDFIISKNTFTGNRMNGISIVGNNIGMIQENTFYNNGRNGIKISDNSQPEIRNNLFQN
ECCCEEEECCCCCCCCCCCEEEEECCCCEEECCCEECCCCCCEEECCCCCCHHHHHHHHC
TAVGIKISDNAAPKVIGNRLIENQNGIIIQGNAQPILRGNYIENNRQNGVAATARSLPDL
CEEEEEECCCCCHHHHHHHHEECCCCEEEECCCCCEEECCEECCCCCCCHHHHHHHCCCC
GNSQEPGRNTIRNNGQYNIYSVVKGKIIPAYGNSLEGDRNYGSIDIAGKIAPPPRVAPVK
CCCCCCCCHHHHCCCCEEEEEEEECEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
NTPTTPNVDQVQRESKKEAVVMETAPLRQDIQVKTKESNFSPSAEKPPEQSISSNIVSRA
CCCCCCCHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
RTQNSTREIVIIPVPLPETQKTSRTNSYEQPNGQRNLQRLLETNPNYYNRQTIKIPVSPP
HCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCC
ESGRRALEALSNLPPRSTPPTYGSKTPVAAPSVLPVPTANIPLGRGGYVPPGIAQNKNPL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLSRLSLRSNSQNHAVALGLRYRVVVSVNNISQQYKLRSLVPDAFSTKINGNSIMQAGAF
CHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHCCHHHHEEECCCCEEECCHH
KSRFQANKLLRTLQNNGLNAQILPVQ
HHHHHHHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA