| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is inlA [H]
Identifier: 113476194
GI number: 113476194
Start: 3984975
End: 3987053
Strand: Reverse
Name: inlA [H]
Synonym: Tery_2585
Alternate gene names: 113476194
Gene position: 3987053-3984975 (Counterclockwise)
Preceding gene: 113476198
Following gene: 113476191
Centisome position: 51.45
GC content: 33.0
Gene sequence:
>2079_bases TTGCTAGAACTGAGTAAATCGAGTAATGAAAATTCATCAGATAATCTTTATCAGCTAGAATTGTATCCTTTTAATCCCCA ATATTGCTCCCAAAGAGGAGAAATTGCCGAAGTTGTCCTGGCTTATCCTGAGCTCAAAAAGTTGCAGATTAATGAAGATA ATCAAGTCATAGTTAAGAAGCAAAAAATTGGTTCAAAGTTGGTTTTAATAATTAAGGTTAATGTCTTCCAAAGAGATGTA TTGAGGGATAAAAATAATGGAGAAAAGGAAGTAATAGCTATAGATATCAAAAACGAAAAAGGTAACAGCCAAATTCAAGA AGTGTTTAAGATTCACTATACTAGCTTAGAAAATAAAGCACAAATTTATCATCCAGAAGTTGAGCAGGAATTAGCACAAT ATTACCTAACTTCAACTGCTGAGGATAATAATATAATAGAGGATAACTTAGAATGGCGAAAGTTAGAGTCAATTAATGAA TCATTAGAGGTTTTAGATTTAGAAGAACCTATCGACTTCTTAACTCTGAAGTTAGAAGAGTTAATTTATGCTCAAAACAA TTGGAGTTATGTTGACATAGATTATATAGATAAAAAAAGAGCTTTGGATTTAAAAATTTTAGATTTAAGTAACAGTACTC TGACTAATGAAGACTTACAAGGGGTTGAACAATTTCCTAATATTACTACTTTAATTGTTGGCAGAAATAGTATTACAAAA CTTGAATTTATTAATAATTATAAAAAGCTCCAACATTTAACAATTATTGGAAAAGAGGTGTTTAATTATATTTGTAGCTA TCAGCCTTTAACTTTATTGTCTCAGTTTAAAGAGTTAAGAGAAATTACCTTAATTGATAATAATTTATCAGATTTAAAAT TTGTCAAACAAGCGAATTTGCAGCATCTTAATAAATTGATACTAGACGATAATCAAATAACTGATTTACAACCTCTTAGC CAATTGACAGCTTTAGAATACTTGTCAGTGGCTAATAATAAAATTCAAAGTATTGATTGTTTAAAAAAACTTAGTAACTT AAAAAACTTAATTTTGAGAAATAATCAAATAGGTAATATCAAGAGCTATTGGCGACAGTTTAATAAACTCATAGAGCTTG ATTTGAAAAATAACAAAATCACAGATTTGAGACCATTTACAGTTATGAAAAGTCTCAAAAAGCTTAACATTTCTAGCAAC CCAATTCAAACCATAATACCATTACAAGGATTATTCCTTAGCCTAGAAGAATTATGGTGGTACAATATAAATTTAATGAT TAATATAAGCAAAAAACCGGAAAAACTACTACCAATTCAACAACTAGAAACGGTAACAGTAAATGCTCAAGGAAAAGAAA TAGCCAGAAATCAATTTAGTGTATTTGTCAGAGAAATTGTAATTGCTGGATCAATAAAACTCTCTTTAGTGCCCATCCCA AAAGGTGAATATATGATGGGAGAAGGATACGGGCAAAAATTAGTCAAAGTAGAAGAATTTTGGATGAGCCAATATCAAAT TACCCAAGAACAATGGGACGCAGTGGCCAACCTTGAAAAAATTGGAACAGAATTGGATGGATCTCCTTCAAACTGGAAAG GAAAAAAACTACCAGTAGAGAAAGTAACTTGGTCTGAAGCACAAGAGTTTTGCCGAAGACTGAGCAAGAAGACAGGGGAG CAATTTAGGCTACCAACAAAAGAAGAATGGGAATATGCTTGTCGTGCAGGAACAACAACACCTTTTTATTTTGGAGAAAC CATAACGTCCGAGTTAGCTAACTTTAACGGGAGGGAAACTCATGCTAATGAACCACAAGGAGCATATCGAGAACGGACAA CAGATGTAGGAATTTTTCCTCCTAATGCTTTTGGCTTATATGACATGCACGGGAATGTAAACGAATGGTGTAATGATAAT TTTGATGGAGACAAAGACAGAAAAGTTATTCGTGGCGGATACTGCCAGGCCGCTCCTAGTTCATGTCGCTCTGCGGCACG CAGCAGCTATATATCATACCAGAGTTCCTACTCTATTGGTTTTCGTGTTGTGATCGTTCCCCCCAAGACTCTTCAATAG
Upstream 100 bases:
>100_bases CTTTTTTACTGGAAATAATCTTAAGTAAATATTAACAATTCAAAGACAAATCTGGAATAAGCCAAGTAAGTTTGAGTCAC AAGAAACTGAGCATTTATTA
Downstream 100 bases:
>100_bases CCCTTTGCCTTTTTTCCCTTTTGCCCTATTGAGCCTTGCCTCTGGTGGGTCGAATTTTTTACCAATATTTGTGTTGAATA GATAATATGCATCTCAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 692; Mature: 692
Protein sequence:
>692_residues MLELSKSSNENSSDNLYQLELYPFNPQYCSQRGEIAEVVLAYPELKKLQINEDNQVIVKKQKIGSKLVLIIKVNVFQRDV LRDKNNGEKEVIAIDIKNEKGNSQIQEVFKIHYTSLENKAQIYHPEVEQELAQYYLTSTAEDNNIIEDNLEWRKLESINE SLEVLDLEEPIDFLTLKLEELIYAQNNWSYVDIDYIDKKRALDLKILDLSNSTLTNEDLQGVEQFPNITTLIVGRNSITK LEFINNYKKLQHLTIIGKEVFNYICSYQPLTLLSQFKELREITLIDNNLSDLKFVKQANLQHLNKLILDDNQITDLQPLS QLTALEYLSVANNKIQSIDCLKKLSNLKNLILRNNQIGNIKSYWRQFNKLIELDLKNNKITDLRPFTVMKSLKKLNISSN PIQTIIPLQGLFLSLEELWWYNINLMINISKKPEKLLPIQQLETVTVNAQGKEIARNQFSVFVREIVIAGSIKLSLVPIP KGEYMMGEGYGQKLVKVEEFWMSQYQITQEQWDAVANLEKIGTELDGSPSNWKGKKLPVEKVTWSEAQEFCRRLSKKTGE QFRLPTKEEWEYACRAGTTTPFYFGETITSELANFNGRETHANEPQGAYRERTTDVGIFPPNAFGLYDMHGNVNEWCNDN FDGDKDRKVIRGGYCQAAPSSCRSAARSSYISYQSSYSIGFRVVIVPPKTLQ
Sequences:
>Translated_692_residues MLELSKSSNENSSDNLYQLELYPFNPQYCSQRGEIAEVVLAYPELKKLQINEDNQVIVKKQKIGSKLVLIIKVNVFQRDV LRDKNNGEKEVIAIDIKNEKGNSQIQEVFKIHYTSLENKAQIYHPEVEQELAQYYLTSTAEDNNIIEDNLEWRKLESINE SLEVLDLEEPIDFLTLKLEELIYAQNNWSYVDIDYIDKKRALDLKILDLSNSTLTNEDLQGVEQFPNITTLIVGRNSITK LEFINNYKKLQHLTIIGKEVFNYICSYQPLTLLSQFKELREITLIDNNLSDLKFVKQANLQHLNKLILDDNQITDLQPLS QLTALEYLSVANNKIQSIDCLKKLSNLKNLILRNNQIGNIKSYWRQFNKLIELDLKNNKITDLRPFTVMKSLKKLNISSN PIQTIIPLQGLFLSLEELWWYNINLMINISKKPEKLLPIQQLETVTVNAQGKEIARNQFSVFVREIVIAGSIKLSLVPIP KGEYMMGEGYGQKLVKVEEFWMSQYQITQEQWDAVANLEKIGTELDGSPSNWKGKKLPVEKVTWSEAQEFCRRLSKKTGE QFRLPTKEEWEYACRAGTTTPFYFGETITSELANFNGRETHANEPQGAYRERTTDVGIFPPNAFGLYDMHGNVNEWCNDN FDGDKDRKVIRGGYCQAAPSSCRSAARSSYISYQSSYSIGFRVVIVPPKTLQ >Mature_692_residues MLELSKSSNENSSDNLYQLELYPFNPQYCSQRGEIAEVVLAYPELKKLQINEDNQVIVKKQKIGSKLVLIIKVNVFQRDV LRDKNNGEKEVIAIDIKNEKGNSQIQEVFKIHYTSLENKAQIYHPEVEQELAQYYLTSTAEDNNIIEDNLEWRKLESINE SLEVLDLEEPIDFLTLKLEELIYAQNNWSYVDIDYIDKKRALDLKILDLSNSTLTNEDLQGVEQFPNITTLIVGRNSITK LEFINNYKKLQHLTIIGKEVFNYICSYQPLTLLSQFKELREITLIDNNLSDLKFVKQANLQHLNKLILDDNQITDLQPLS QLTALEYLSVANNKIQSIDCLKKLSNLKNLILRNNQIGNIKSYWRQFNKLIELDLKNNKITDLRPFTVMKSLKKLNISSN PIQTIIPLQGLFLSLEELWWYNINLMINISKKPEKLLPIQQLETVTVNAQGKEIARNQFSVFVREIVIAGSIKLSLVPIP KGEYMMGEGYGQKLVKVEEFWMSQYQITQEQWDAVANLEKIGTELDGSPSNWKGKKLPVEKVTWSEAQEFCRRLSKKTGE QFRLPTKEEWEYACRAGTTTPFYFGETITSELANFNGRETHANEPQGAYRERTTDVGIFPPNAFGLYDMHGNVNEWCNDN FDGDKDRKVIRGGYCQAAPSSCRSAARSSYISYQSSYSIGFRVVIVPPKTLQ
Specific function: Mediates the entry of Listeria monocytogenes into cells [H]
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 14 LRR (leucine-rich) repeats [H]
Homologues:
Organism=Homo sapiens, GI257470975, Length=300, Percent_Identity=27.3333333333333, Blast_Score=79, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014755 - InterPro: IPR019948 - InterPro: IPR014756 - InterPro: IPR001611 - InterPro: IPR013378 - InterPro: IPR019931 - InterPro: IPR012569 - InterPro: IPR001899 [H]
Pfam domain/function: PF09479 Flg_new; PF00746 Gram_pos_anchor; PF00560 LRR_1; PF08191 LRR_adjacent [H]
EC number: NA
Molecular weight: Translated: 79774; Mature: 79774
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELSKSSNENSSDNLYQLELYPFNPQYCSQRGEIAEVVLAYPELKKLQINEDNQVIVKK CCCCCCCCCCCCCCCEEEEEEEECCHHHHCCCCCHHHHHHCCCCCEEEEECCCCEEEEEE QKIGSKLVLIIKVNVFQRDVLRDKNNGEKEVIAIDIKNEKGNSQIQEVFKIHYTSLENKA ECCCCEEEEEEEECHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCC QIYHPEVEQELAQYYLTSTAEDNNIIEDNLEWRKLESINESLEVLDLEEPIDFLTLKLEE EEECCHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHH LIYAQNNWSYVDIDYIDKKRALDLKILDLSNSTLTNEDLQGVEQFPNITTLIVGRNSITK HHEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCH LEFINNYKKLQHLTIIGKEVFNYICSYQPLTLLSQFKELREITLIDNNLSDLKFVKQANL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHH QHLNKLILDDNQITDLQPLSQLTALEYLSVANNKIQSIDCLKKLSNLKNLILRNNQIGNI HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCH KSYWRQFNKLIELDLKNNKITDLRPFTVMKSLKKLNISSNPIQTIIPLQGLFLSLEELWW HHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEE YNINLMINISKKPEKLLPIQQLETVTVNAQGKEIARNQFSVFVREIVIAGSIKLSLVPIP EEEEEEEEECCCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC KGEYMMGEGYGQKLVKVEEFWMSQYQITQEQWDAVANLEKIGTELDGSPSNWKGKKLPVE CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH KVTWSEAQEFCRRLSKKTGEQFRLPTKEEWEYACRAGTTTPFYFGETITSELANFNGRET HCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEECCHHHHHHHHCCCCCCC HANEPQGAYRERTTDVGIFPPNAFGLYDMHGNVNEWCNDNFDGDKDRKVIRGGYCQAAPS CCCCCCCHHHHCCCCCEEECCCCCEEEECCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCH SCRSAARSSYISYQSSYSIGFRVVIVPPKTLQ HHHHHHHHHHHEECCCCCCCEEEEEECCCCCC >Mature Secondary Structure MLELSKSSNENSSDNLYQLELYPFNPQYCSQRGEIAEVVLAYPELKKLQINEDNQVIVKK CCCCCCCCCCCCCCCEEEEEEEECCHHHHCCCCCHHHHHHCCCCCEEEEECCCCEEEEEE QKIGSKLVLIIKVNVFQRDVLRDKNNGEKEVIAIDIKNEKGNSQIQEVFKIHYTSLENKA ECCCCEEEEEEEECHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCC QIYHPEVEQELAQYYLTSTAEDNNIIEDNLEWRKLESINESLEVLDLEEPIDFLTLKLEE EEECCHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHH LIYAQNNWSYVDIDYIDKKRALDLKILDLSNSTLTNEDLQGVEQFPNITTLIVGRNSITK HHEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCH LEFINNYKKLQHLTIIGKEVFNYICSYQPLTLLSQFKELREITLIDNNLSDLKFVKQANL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHH QHLNKLILDDNQITDLQPLSQLTALEYLSVANNKIQSIDCLKKLSNLKNLILRNNQIGNI HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCH KSYWRQFNKLIELDLKNNKITDLRPFTVMKSLKKLNISSNPIQTIIPLQGLFLSLEELWW HHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEE YNINLMINISKKPEKLLPIQQLETVTVNAQGKEIARNQFSVFVREIVIAGSIKLSLVPIP EEEEEEEEECCCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC KGEYMMGEGYGQKLVKVEEFWMSQYQITQEQWDAVANLEKIGTELDGSPSNWKGKKLPVE CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH KVTWSEAQEFCRRLSKKTGEQFRLPTKEEWEYACRAGTTTPFYFGETITSELANFNGRET HCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEECCHHHHHHHHCCCCCCC HANEPQGAYRERTTDVGIFPPNAFGLYDMHGNVNEWCNDNFDGDKDRKVIRGGYCQAAPS CCCCCCCHHHHCCCCCEEECCCCCEEEECCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCH SCRSAARSSYISYQSSYSIGFRVVIVPPKTLQ HHHHHHHHHHHEECCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9541569 [H]