The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476155

Identifier: 113476155

GI number: 113476155

Start: 3918665

End: 3919102

Strand: Reverse

Name: 113476155

Synonym: Tery_2542

Alternate gene names: NA

Gene position: 3919102-3918665 (Counterclockwise)

Preceding gene: 113476156

Following gene: 113476148

Centisome position: 50.57

GC content: 36.76

Gene sequence:

>438_bases
ATGGAAAACGATAATTCAAAAAAAACCAGTATATACGGTGACAATATCAAACAACAAGGTGCTTTTAGTATAGGTGTTAA
TAAAGGAGAAGTTGAAAATCAAAACACTAATATAGCTGTAGGTTATAACAACGGAAAAATCAAGGTTGAGAAACTAGCTG
GAAACATTAATGAAGCTCAACAAAGAACTTTAGCTGAAACCGCAGCAGAAATTCAACAGCTTCTTCAACAATTAGAGCTA
TCAAACCCTACGGAAACTACCGCAGGGCAAATGGCAGTTGTTGCTAAAGCCGTTGAAGTTGTTGAAAATCACCCCACATT
AAAACAGCGAGTAATAGGAGTATTAAAATCAGCAGGAACAGAAGCATTCAAAGAAGCTCTCGATCATCCAATTGCTAATG
TTTTAGTGGCAGCTTTTCAAGGTTGGACTCAAGCATAA

Upstream 100 bases:

>100_bases
AATTTATCCACAAATTAGAAACATAAAAGTCGTATATAGCTGTTCTACTTGAGAGAACATCAGTAGAAAATTAAGTAGTA
CATATCTAGAGACAAGCATT

Downstream 100 bases:

>100_bases
AATCAGTTATCAGTTAACCTCCTTCCGAGGAACTGCGTTTTTCATATTCCGTAGCGCAACAGTTATCACTTAGCGATCGC
TTCAATTGTCAAGCAAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MENDNSKKTSIYGDNIKQQGAFSIGVNKGEVENQNTNIAVGYNNGKIKVEKLAGNINEAQQRTLAETAAEIQQLLQQLEL
SNPTETTAGQMAVVAKAVEVVENHPTLKQRVIGVLKSAGTEAFKEALDHPIANVLVAAFQGWTQA

Sequences:

>Translated_145_residues
MENDNSKKTSIYGDNIKQQGAFSIGVNKGEVENQNTNIAVGYNNGKIKVEKLAGNINEAQQRTLAETAAEIQQLLQQLEL
SNPTETTAGQMAVVAKAVEVVENHPTLKQRVIGVLKSAGTEAFKEALDHPIANVLVAAFQGWTQA
>Mature_145_residues
MENDNSKKTSIYGDNIKQQGAFSIGVNKGEVENQNTNIAVGYNNGKIKVEKLAGNINEAQQRTLAETAAEIQQLLQQLEL
SNPTETTAGQMAVVAKAVEVVENHPTLKQRVIGVLKSAGTEAFKEALDHPIANVLVAAFQGWTQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15602; Mature: 15602

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENDNSKKTSIYGDNIKQQGAFSIGVNKGEVENQNTNIAVGYNNGKIKVEKLAGNINEAQ
CCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCEEEHHHHCCCCHHH
QRTLAETAAEIQQLLQQLELSNPTETTAGQMAVVAKAVEVVENHPTLKQRVIGVLKSAGT
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCH
EAFKEALDHPIANVLVAAFQGWTQA
HHHHHHHHCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MENDNSKKTSIYGDNIKQQGAFSIGVNKGEVENQNTNIAVGYNNGKIKVEKLAGNINEAQ
CCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCEEEHHHHCCCCHHH
QRTLAETAAEIQQLLQQLELSNPTETTAGQMAVVAKAVEVVENHPTLKQRVIGVLKSAGT
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCH
EAFKEALDHPIANVLVAAFQGWTQA
HHHHHHHHCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA