Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476156

Identifier: 113476156

GI number: 113476156

Start: 3919312

End: 3920388

Strand: Reverse

Name: 113476156

Synonym: Tery_2543

Alternate gene names: NA

Gene position: 3920388-3919312 (Counterclockwise)

Preceding gene: 113476161

Following gene: 113476155

Centisome position: 50.58

GC content: 35.47

Gene sequence:

>1077_bases
ATGAACATTCCTAATTCGCAGAACCCAGCTTCTATGCCTGGTGAATCTGATGAATATTCAGATATAATATCAAGTGAATG
TGACTACTTGTCATATCAACATGATCATTTATCTTTCCCGAACTCAGGAGATCCCCATCGCCTAGAGCACGATATACCCA
CAAGGGAGAATATTTATGAAAATCAGTCACCGTATTCCTTTGACAATGAATGGAATAATTATGAAACAACAGCATTTGAT
CATGACTACAACTCTCCTAATTATCCAGAAAATCAGGCTTCCTACTCCGTTCCTACTAGCAATAGACCAGAAACCGAAAC
ACAAAACCTAAATTCTGGAGTGGAAAACCATTCAGAGAACTTTTCCTCTTACTCTATCAATAGTAGACAAGGAAATAATG
AGTATAGTTGGGAATATTCCAATCAATATAGTTTAAGTTCTTTCCAAAACCCCTTAATGAATGAACCGCAACTTCAGAAG
AATTCGAGTTTAGAAGACAGCGAGGAAGACGATAACAATAGGGAAAATAGTAATCTATCTCAAAATGGAAACCAGAATGG
GTATCAAAACGGAACCCCAAATAGTACCCAGACTTTTGCTGCAAACATAATAGGGTCTGGTGTTGAATTTTCTCTTTGGT
CATTAGGACTCTCCATGATGAATGGAGAATCAAACGTTATACATCATCATATATCAAGTAACACACATTTTTACATAGAG
GGAAACACTGACATACACGGTGACAAAATAGAACAACAAGGAAGTTTTGGTACAGGTATTAATGTAGGAGAAGTTGAAAA
TCAAAACACTAATGTAGATGTAGGTTTTGATAACAGAAAAATCACAGCTGATACACTTGGAAGCATTAACGAACTTCAAG
AAAAAACTAGAGGTGAAACATTACCAAAAATTAACCAACTTATTCCACAATTAGAAAATTTAAACCCTATAGAAATCAAG
ATACCTAACTTGACACTTCCTGAACACATCGAAATGATGAAAAACAATTTCGCGCCAAGAGAACCAATTATCAGAATTGG
AAAACCACTATTTGGTAACCACTTATTTAGCAAATGA

Upstream 100 bases:

>100_bases
CAAACATATCAAAGGATATAACTTGATGTAGTGGCCAGAAGGAAGTCCAGAGATATTTTGGCCTTCCATAATACTTAATA
TGGAATGAAGTTTTGTCACC

Downstream 100 bases:

>100_bases
TATCTAAGATCCTCCAACGACAATGAGCATACTTGTCAATATTGATATTGGAATCTCCAAGGCAGTATTTTTTCCAGTAA
ATCTTCTACAATTTAGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MNIPNSQNPASMPGESDEYSDIISSECDYLSYQHDHLSFPNSGDPHRLEHDIPTRENIYENQSPYSFDNEWNNYETTAFD
HDYNSPNYPENQASYSVPTSNRPETETQNLNSGVENHSENFSSYSINSRQGNNEYSWEYSNQYSLSSFQNPLMNEPQLQK
NSSLEDSEEDDNNRENSNLSQNGNQNGYQNGTPNSTQTFAANIIGSGVEFSLWSLGLSMMNGESNVIHHHISSNTHFYIE
GNTDIHGDKIEQQGSFGTGINVGEVENQNTNVDVGFDNRKITADTLGSINELQEKTRGETLPKINQLIPQLENLNPIEIK
IPNLTLPEHIEMMKNNFAPREPIIRIGKPLFGNHLFSK

Sequences:

>Translated_358_residues
MNIPNSQNPASMPGESDEYSDIISSECDYLSYQHDHLSFPNSGDPHRLEHDIPTRENIYENQSPYSFDNEWNNYETTAFD
HDYNSPNYPENQASYSVPTSNRPETETQNLNSGVENHSENFSSYSINSRQGNNEYSWEYSNQYSLSSFQNPLMNEPQLQK
NSSLEDSEEDDNNRENSNLSQNGNQNGYQNGTPNSTQTFAANIIGSGVEFSLWSLGLSMMNGESNVIHHHISSNTHFYIE
GNTDIHGDKIEQQGSFGTGINVGEVENQNTNVDVGFDNRKITADTLGSINELQEKTRGETLPKINQLIPQLENLNPIEIK
IPNLTLPEHIEMMKNNFAPREPIIRIGKPLFGNHLFSK
>Mature_358_residues
MNIPNSQNPASMPGESDEYSDIISSECDYLSYQHDHLSFPNSGDPHRLEHDIPTRENIYENQSPYSFDNEWNNYETTAFD
HDYNSPNYPENQASYSVPTSNRPETETQNLNSGVENHSENFSSYSINSRQGNNEYSWEYSNQYSLSSFQNPLMNEPQLQK
NSSLEDSEEDDNNRENSNLSQNGNQNGYQNGTPNSTQTFAANIIGSGVEFSLWSLGLSMMNGESNVIHHHISSNTHFYIE
GNTDIHGDKIEQQGSFGTGINVGEVENQNTNVDVGFDNRKITADTLGSINELQEKTRGETLPKINQLIPQLENLNPIEIK
IPNLTLPEHIEMMKNNFAPREPIIRIGKPLFGNHLFSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40508; Mature: 40508

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIPNSQNPASMPGESDEYSDIISSECDYLSYQHDHLSFPNSGDPHRLEHDIPTRENIYE
CCCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
NQSPYSFDNEWNNYETTAFDHDYNSPNYPENQASYSVPTSNRPETETQNLNSGVENHSEN
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
FSSYSINSRQGNNEYSWEYSNQYSLSSFQNPLMNEPQLQKNSSLEDSEEDDNNRENSNLS
CCEEECCCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QNGNQNGYQNGTPNSTQTFAANIIGSGVEFSLWSLGLSMMNGESNVIHHHISSNTHFYIE
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCEEEEEE
GNTDIHGDKIEQQGSFGTGINVGEVENQNTNVDVGFDNRKITADTLGSINELQEKTRGET
CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHHHCCCC
LPKINQLIPQLENLNPIEIKIPNLTLPEHIEMMKNNFAPREPIIRIGKPLFGNHLFSK
CHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MNIPNSQNPASMPGESDEYSDIISSECDYLSYQHDHLSFPNSGDPHRLEHDIPTRENIYE
CCCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
NQSPYSFDNEWNNYETTAFDHDYNSPNYPENQASYSVPTSNRPETETQNLNSGVENHSEN
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
FSSYSINSRQGNNEYSWEYSNQYSLSSFQNPLMNEPQLQKNSSLEDSEEDDNNRENSNLS
CCEEECCCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QNGNQNGYQNGTPNSTQTFAANIIGSGVEFSLWSLGLSMMNGESNVIHHHISSNTHFYIE
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCEEEEEE
GNTDIHGDKIEQQGSFGTGINVGEVENQNTNVDVGFDNRKITADTLGSINELQEKTRGET
CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHHHCCCC
LPKINQLIPQLENLNPIEIKIPNLTLPEHIEMMKNNFAPREPIIRIGKPLFGNHLFSK
CHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA