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The map label for this gene is ybbM [C]

Identifier: 113476128

GI number: 113476128

Start: 3875500

End: 3876276

Strand: Reverse

Name: ybbM [C]

Synonym: Tery_2510

Alternate gene names: 113476128

Gene position: 3876276-3875500 (Counterclockwise)

Preceding gene: 113476133

Following gene: 113476126

Centisome position: 50.02

GC content: 29.86

Gene sequence:

>777_bases
ATGGATATAATTAGATTAACACTTAGTGATGTAGCTATGGCTTTAGGACTTATTGCTATAACTATGGGTCTATCAGCTTG
GCAAAAATTAGGATTAGAATGGCAACTATTAATAGCCACAATTCGTACTATTGTACAATTAATATTTGTTGGCTATGTAT
TAACAATAGTATTTACAATTAAACAACCTTGGTTAATTCTTGCTGTTTTAATAGTTATGTTAACAGTTGCTTCTGTAGTT
TCTAGAAATAGAATTAGTCAAAAAATACCTCAATTATTACTTTTAGTTTGGAGTTCTATTTTAACGAGTACAACTTTAAG
TATTAGCTATACAAATTTATTGGTAATTAAACCTGAAAATTGGTATGAACCTCAATATTTAATTCCTTTAGTGGGAATAG
TATTAGGAAATGGGATGAATGCAGCAGCGATCGCTGGAGAAAGACTTGTCAGTACAATTAACTCTAATTCTGTAGAAATT
GAAACTTATTTAAGCTTAGGATCAACCCCTGAACAAGCAATTGTTAAATACAGAAAAGATGCTATTCGTGCTGCATTAAT
ACCTACTTTAAATTCAATGATGGTAATTGGAATTGTCACCCTTCCTGGTATTGTTACTGGTCAGTTATTAAGTGGTATTA
ATCCTCTGGATGCTGTAGCATATCAAATGTTAATTATGTTTCTTTTGACTTTTGCAAATTTAGTTACAACTTTATTAGTT
ACTTACGGTTTATGTAGACAATTTTTTAATCAAGATGCCCAACTTAAAAATTTATAA

Upstream 100 bases:

>100_bases
ATTTTGCTCAAGGTTATTATAAGGGTAAGATATCAGACCCAAGTTTTTGGTAAAAGTTTTTGTTCAGTGATAGTTGATTT
CAACTGTATGAAATTTTGTT

Downstream 100 bases:

>100_bases
GTTTGAGGAATTATTAATAAGTATAAACAATGTATTGTTAATATTTATTCAAATATTGACTCAGAATTAGGTCTTTCGGC
CACCCCTGAGTTGAGGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MDIIRLTLSDVAMALGLIAITMGLSAWQKLGLEWQLLIATIRTIVQLIFVGYVLTIVFTIKQPWLILAVLIVMLTVASVV
SRNRISQKIPQLLLLVWSSILTSTTLSISYTNLLVIKPENWYEPQYLIPLVGIVLGNGMNAAAIAGERLVSTINSNSVEI
ETYLSLGSTPEQAIVKYRKDAIRAALIPTLNSMMVIGIVTLPGIVTGQLLSGINPLDAVAYQMLIMFLLTFANLVTTLLV
TYGLCRQFFNQDAQLKNL

Sequences:

>Translated_258_residues
MDIIRLTLSDVAMALGLIAITMGLSAWQKLGLEWQLLIATIRTIVQLIFVGYVLTIVFTIKQPWLILAVLIVMLTVASVV
SRNRISQKIPQLLLLVWSSILTSTTLSISYTNLLVIKPENWYEPQYLIPLVGIVLGNGMNAAAIAGERLVSTINSNSVEI
ETYLSLGSTPEQAIVKYRKDAIRAALIPTLNSMMVIGIVTLPGIVTGQLLSGINPLDAVAYQMLIMFLLTFANLVTTLLV
TYGLCRQFFNQDAQLKNL
>Mature_258_residues
MDIIRLTLSDVAMALGLIAITMGLSAWQKLGLEWQLLIATIRTIVQLIFVGYVLTIVFTIKQPWLILAVLIVMLTVASVV
SRNRISQKIPQLLLLVWSSILTSTTLSISYTNLLVIKPENWYEPQYLIPLVGIVLGNGMNAAAIAGERLVSTINSNSVEI
ETYLSLGSTPEQAIVKYRKDAIRAALIPTLNSMMVIGIVTLPGIVTGQLLSGINPLDAVAYQMLIMFLLTFANLVTTLLV
TYGLCRQFFNQDAQLKNL

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=255, Percent_Identity=31.7647058823529, Blast_Score=134, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28364; Mature: 28364

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIRLTLSDVAMALGLIAITMGLSAWQKLGLEWQLLIATIRTIVQLIFVGYVLTIVFTI
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQPWLILAVLIVMLTVASVVSRNRISQKIPQLLLLVWSSILTSTTLSISYTNLLVIKPEN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCC
WYEPQYLIPLVGIVLGNGMNAAAIAGERLVSTINSNSVEIETYLSLGSTPEQAIVKYRKD
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHHH
AIRAALIPTLNSMMVIGIVTLPGIVTGQLLSGINPLDAVAYQMLIMFLLTFANLVTTLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TYGLCRQFFNQDAQLKNL
HHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDIIRLTLSDVAMALGLIAITMGLSAWQKLGLEWQLLIATIRTIVQLIFVGYVLTIVFTI
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQPWLILAVLIVMLTVASVVSRNRISQKIPQLLLLVWSSILTSTTLSISYTNLLVIKPEN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCC
WYEPQYLIPLVGIVLGNGMNAAAIAGERLVSTINSNSVEIETYLSLGSTPEQAIVKYRKD
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHHH
AIRAALIPTLNSMMVIGIVTLPGIVTGQLLSGINPLDAVAYQMLIMFLLTFANLVTTLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TYGLCRQFFNQDAQLKNL
HHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]