Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476133

Identifier: 113476133

GI number: 113476133

Start: 3882122

End: 3883555

Strand: Reverse

Name: 113476133

Synonym: Tery_2515

Alternate gene names: NA

Gene position: 3883555-3882122 (Counterclockwise)

Preceding gene: 113476134

Following gene: 113476128

Centisome position: 50.11

GC content: 39.54

Gene sequence:

>1434_bases
ATGGGTCGTCTCTACTGGACAGTGTACCAAAATGCCCTTGTTTGGACGGGGGAACTGAAGTCCCTTTTGTCTCTTCCTAA
CTACCAACCCAAAATCGACCGCGCTCCGATGGAAGACTTTTTGGGGCTACGATATATGATTGGAGATCGCTCTTGGTTTG
AAAATGTCGAACTCCTCCCTGCAGCAACCGTTTTTACCTGGGACATCCCAGGAAAAACCCTCTCTCGAAATCGTTATTGG
GGATGGGATGAACTTACTCCCCTCACTACTCCTCCCCCAGAAAGCGAAGCCGTGGAAACCCTCGGACATTTATTCGTTGA
TGCTGTACAAAGTCGGGTTTATCCTGGAGAAAGAGTAGGACTTACCCTTAGTGGAGGACTAGACTCCCGTGCTATTTTAG
CGGCCATGCCCGATCATAGTCATCCCGTTAATACTATTACCCATGGTCGTAAAGACTGTGAAGATTATCGCATTGCTGCC
CAAGTTGCTGCAATTGCAGGAGATAACAGTTATTTTGCCGAAATGAATGCTGAAAATTGGCTATTTTCTAGGGTAAAAAC
CATCTGGGAAACCGATGCCTACGGTAGCTTTATTCATTTTCACTTTTTGTCATCATTAACCCAAATTAAAACTCAAGACT
TATTTAACATAAATTTACATGGAGCATGGGGAGATGTAACTGCAATGAATATTTTTGATGGTCTAAAATTTCCTGATGTA
GTTAACAAACGCTTAGGATTAGAAAAATTTGCTCTTTCTTTACAGCATAAAAATTCAGTTTTTGAGAGAATGAATAATTA
TTTTAAATTGTGCCATTCTTCTCCTCATATTATTTGGATGGACCATCGCATTCGTCGCTTTATTTTCAAAGATATTAATG
TTAGCTTAGTACAGGGTATAGAAACAAGAGCTCCTTTTATAGATTGCTCTTTACAGGACTTTTTATTTACTCTAAGTTCT
ACTTTTTCCGAAGATTCTAATCTTTATAAACCTATGCTTTGTCAGTTTTTTCCGAAATACTATCAAACCATTCCTTGGCA
AAGTACTGGAGAACCGATTAGTCCCCCAAATTTCACACGTCAGGTTCAAAAAAAATTAGTGCAATTCCAAACCAAAGTCA
CTGGCAAATTAAACCAATTTGGATTATCCTTCCCTCAAGCAAATTCCTCGAAAAAACGAAAACCTGACAAAGACTATGCC
AATTATGCGGAATGGATGCGTCAAAATCCCGCTTATTCCCTCTATCAAACAATTTTAGAAAATCCCAATGCCCTTTATCC
TGAATATTTATCTCCTGAAGAAACCAAAAAAATCAAACAAAACTGGCAACGTCATTTAAACGGCGAAGACTTAGGCGATA
GCGTCAGTCTGGCCTTAACACTTGAACTATGGCTGCAACAGGTTTTTAATCAAAAATATCGTACTGGGGAGTGA

Upstream 100 bases:

>100_bases
TGAGGGTTTAAACTTTTTGCGATAGGTTGAAGGGGTTTATGTCGCTTGTTTGTACGATCGCAGAAAACAAAAACTCTATT
TAATAAGCGATCGCTACGGG

Downstream 100 bases:

>100_bases
TGATATTCTCCCTATCAAACTCTGAAAGTATCTGTGCAAGGAATTTTCGATTATGTTCGAGGATGAGATGCCCTGCTTTT
TGTTGTAGCAGTTGGCAATT

Product: asparagine synthase

Products: AMP; diphosphate; L-asparagine; L-glutamate

Alternate protein names: Asparagine Synthetase; Asparagine Synthase Glutamine-Hydrolyzing

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MGRLYWTVYQNALVWTGELKSLLSLPNYQPKIDRAPMEDFLGLRYMIGDRSWFENVELLPAATVFTWDIPGKTLSRNRYW
GWDELTPLTTPPPESEAVETLGHLFVDAVQSRVYPGERVGLTLSGGLDSRAILAAMPDHSHPVNTITHGRKDCEDYRIAA
QVAAIAGDNSYFAEMNAENWLFSRVKTIWETDAYGSFIHFHFLSSLTQIKTQDLFNINLHGAWGDVTAMNIFDGLKFPDV
VNKRLGLEKFALSLQHKNSVFERMNNYFKLCHSSPHIIWMDHRIRRFIFKDINVSLVQGIETRAPFIDCSLQDFLFTLSS
TFSEDSNLYKPMLCQFFPKYYQTIPWQSTGEPISPPNFTRQVQKKLVQFQTKVTGKLNQFGLSFPQANSSKKRKPDKDYA
NYAEWMRQNPAYSLYQTILENPNALYPEYLSPEETKKIKQNWQRHLNGEDLGDSVSLALTLELWLQQVFNQKYRTGE

Sequences:

>Translated_477_residues
MGRLYWTVYQNALVWTGELKSLLSLPNYQPKIDRAPMEDFLGLRYMIGDRSWFENVELLPAATVFTWDIPGKTLSRNRYW
GWDELTPLTTPPPESEAVETLGHLFVDAVQSRVYPGERVGLTLSGGLDSRAILAAMPDHSHPVNTITHGRKDCEDYRIAA
QVAAIAGDNSYFAEMNAENWLFSRVKTIWETDAYGSFIHFHFLSSLTQIKTQDLFNINLHGAWGDVTAMNIFDGLKFPDV
VNKRLGLEKFALSLQHKNSVFERMNNYFKLCHSSPHIIWMDHRIRRFIFKDINVSLVQGIETRAPFIDCSLQDFLFTLSS
TFSEDSNLYKPMLCQFFPKYYQTIPWQSTGEPISPPNFTRQVQKKLVQFQTKVTGKLNQFGLSFPQANSSKKRKPDKDYA
NYAEWMRQNPAYSLYQTILENPNALYPEYLSPEETKKIKQNWQRHLNGEDLGDSVSLALTLELWLQQVFNQKYRTGE
>Mature_476_residues
GRLYWTVYQNALVWTGELKSLLSLPNYQPKIDRAPMEDFLGLRYMIGDRSWFENVELLPAATVFTWDIPGKTLSRNRYWG
WDELTPLTTPPPESEAVETLGHLFVDAVQSRVYPGERVGLTLSGGLDSRAILAAMPDHSHPVNTITHGRKDCEDYRIAAQ
VAAIAGDNSYFAEMNAENWLFSRVKTIWETDAYGSFIHFHFLSSLTQIKTQDLFNINLHGAWGDVTAMNIFDGLKFPDVV
NKRLGLEKFALSLQHKNSVFERMNNYFKLCHSSPHIIWMDHRIRRFIFKDINVSLVQGIETRAPFIDCSLQDFLFTLSST
FSEDSNLYKPMLCQFFPKYYQTIPWQSTGEPISPPNFTRQVQKKLVQFQTKVTGKLNQFGLSFPQANSSKKRKPDKDYAN
YAEWMRQNPAYSLYQTILENPNALYPEYLSPEETKKIKQNWQRHLNGEDLGDSVSLALTLELWLQQVFNQKYRTGE

Specific function: Unknown

COG id: COG0367

COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 6.3.5.4

Molecular weight: Translated: 55137; Mature: 55006

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLYWTVYQNALVWTGELKSLLSLPNYQPKIDRAPMEDFLGLRYMIGDRSWFENVELLP
CCCEEEEEECCCEEEHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEECCCHHHCCCEECE
AATVFTWDIPGKTLSRNRYWGWDELTPLTTPPPESEAVETLGHLFVDAVQSRVYPGERVG
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
LTLSGGLDSRAILAAMPDHSHPVNTITHGRKDCEDYRIAAQVAAIAGDNSYFAEMNAENW
EEEECCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHH
LFSRVKTIWETDAYGSFIHFHFLSSLTQIKTQDLFNINLHGAWGDVTAMNIFDGLKFPDV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCCHHH
VNKRLGLEKFALSLQHKNSVFERMNNYFKLCHSSPHIIWMDHRIRRFIFKDINVSLVQGI
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCHHHHHCH
ETRAPFIDCSLQDFLFTLSSTFSEDSNLYKPMLCQFFPKYYQTIPWQSTGEPISPPNFTR
HHCCCEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
QVQKKLVQFQTKVTGKLNQFGLSFPQANSSKKRKPDKDYANYAEWMRQNPAYSLYQTILE
HHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHC
NPNALYPEYLSPEETKKIKQNWQRHLNGEDLGDSVSLALTLELWLQQVFNQKYRTGE
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GRLYWTVYQNALVWTGELKSLLSLPNYQPKIDRAPMEDFLGLRYMIGDRSWFENVELLP
CCEEEEEECCCEEEHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEECCCHHHCCCEECE
AATVFTWDIPGKTLSRNRYWGWDELTPLTTPPPESEAVETLGHLFVDAVQSRVYPGERVG
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
LTLSGGLDSRAILAAMPDHSHPVNTITHGRKDCEDYRIAAQVAAIAGDNSYFAEMNAENW
EEEECCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHH
LFSRVKTIWETDAYGSFIHFHFLSSLTQIKTQDLFNINLHGAWGDVTAMNIFDGLKFPDV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCCHHH
VNKRLGLEKFALSLQHKNSVFERMNNYFKLCHSSPHIIWMDHRIRRFIFKDINVSLVQGI
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCHHHHHCH
ETRAPFIDCSLQDFLFTLSSTFSEDSNLYKPMLCQFFPKYYQTIPWQSTGEPISPPNFTR
HHCCCEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
QVQKKLVQFQTKVTGKLNQFGLSFPQANSSKKRKPDKDYANYAEWMRQNPAYSLYQTILE
HHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHC
NPNALYPEYLSPEETKKIKQNWQRHLNGEDLGDSVSLALTLELWLQQVFNQKYRTGE
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-aspartate; L-glutamine

Specific reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA