| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476133
Identifier: 113476133
GI number: 113476133
Start: 3882122
End: 3883555
Strand: Reverse
Name: 113476133
Synonym: Tery_2515
Alternate gene names: NA
Gene position: 3883555-3882122 (Counterclockwise)
Preceding gene: 113476134
Following gene: 113476128
Centisome position: 50.11
GC content: 39.54
Gene sequence:
>1434_bases ATGGGTCGTCTCTACTGGACAGTGTACCAAAATGCCCTTGTTTGGACGGGGGAACTGAAGTCCCTTTTGTCTCTTCCTAA CTACCAACCCAAAATCGACCGCGCTCCGATGGAAGACTTTTTGGGGCTACGATATATGATTGGAGATCGCTCTTGGTTTG AAAATGTCGAACTCCTCCCTGCAGCAACCGTTTTTACCTGGGACATCCCAGGAAAAACCCTCTCTCGAAATCGTTATTGG GGATGGGATGAACTTACTCCCCTCACTACTCCTCCCCCAGAAAGCGAAGCCGTGGAAACCCTCGGACATTTATTCGTTGA TGCTGTACAAAGTCGGGTTTATCCTGGAGAAAGAGTAGGACTTACCCTTAGTGGAGGACTAGACTCCCGTGCTATTTTAG CGGCCATGCCCGATCATAGTCATCCCGTTAATACTATTACCCATGGTCGTAAAGACTGTGAAGATTATCGCATTGCTGCC CAAGTTGCTGCAATTGCAGGAGATAACAGTTATTTTGCCGAAATGAATGCTGAAAATTGGCTATTTTCTAGGGTAAAAAC CATCTGGGAAACCGATGCCTACGGTAGCTTTATTCATTTTCACTTTTTGTCATCATTAACCCAAATTAAAACTCAAGACT TATTTAACATAAATTTACATGGAGCATGGGGAGATGTAACTGCAATGAATATTTTTGATGGTCTAAAATTTCCTGATGTA GTTAACAAACGCTTAGGATTAGAAAAATTTGCTCTTTCTTTACAGCATAAAAATTCAGTTTTTGAGAGAATGAATAATTA TTTTAAATTGTGCCATTCTTCTCCTCATATTATTTGGATGGACCATCGCATTCGTCGCTTTATTTTCAAAGATATTAATG TTAGCTTAGTACAGGGTATAGAAACAAGAGCTCCTTTTATAGATTGCTCTTTACAGGACTTTTTATTTACTCTAAGTTCT ACTTTTTCCGAAGATTCTAATCTTTATAAACCTATGCTTTGTCAGTTTTTTCCGAAATACTATCAAACCATTCCTTGGCA AAGTACTGGAGAACCGATTAGTCCCCCAAATTTCACACGTCAGGTTCAAAAAAAATTAGTGCAATTCCAAACCAAAGTCA CTGGCAAATTAAACCAATTTGGATTATCCTTCCCTCAAGCAAATTCCTCGAAAAAACGAAAACCTGACAAAGACTATGCC AATTATGCGGAATGGATGCGTCAAAATCCCGCTTATTCCCTCTATCAAACAATTTTAGAAAATCCCAATGCCCTTTATCC TGAATATTTATCTCCTGAAGAAACCAAAAAAATCAAACAAAACTGGCAACGTCATTTAAACGGCGAAGACTTAGGCGATA GCGTCAGTCTGGCCTTAACACTTGAACTATGGCTGCAACAGGTTTTTAATCAAAAATATCGTACTGGGGAGTGA
Upstream 100 bases:
>100_bases TGAGGGTTTAAACTTTTTGCGATAGGTTGAAGGGGTTTATGTCGCTTGTTTGTACGATCGCAGAAAACAAAAACTCTATT TAATAAGCGATCGCTACGGG
Downstream 100 bases:
>100_bases TGATATTCTCCCTATCAAACTCTGAAAGTATCTGTGCAAGGAATTTTCGATTATGTTCGAGGATGAGATGCCCTGCTTTT TGTTGTAGCAGTTGGCAATT
Product: asparagine synthase
Products: AMP; diphosphate; L-asparagine; L-glutamate
Alternate protein names: Asparagine Synthetase; Asparagine Synthase Glutamine-Hydrolyzing
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MGRLYWTVYQNALVWTGELKSLLSLPNYQPKIDRAPMEDFLGLRYMIGDRSWFENVELLPAATVFTWDIPGKTLSRNRYW GWDELTPLTTPPPESEAVETLGHLFVDAVQSRVYPGERVGLTLSGGLDSRAILAAMPDHSHPVNTITHGRKDCEDYRIAA QVAAIAGDNSYFAEMNAENWLFSRVKTIWETDAYGSFIHFHFLSSLTQIKTQDLFNINLHGAWGDVTAMNIFDGLKFPDV VNKRLGLEKFALSLQHKNSVFERMNNYFKLCHSSPHIIWMDHRIRRFIFKDINVSLVQGIETRAPFIDCSLQDFLFTLSS TFSEDSNLYKPMLCQFFPKYYQTIPWQSTGEPISPPNFTRQVQKKLVQFQTKVTGKLNQFGLSFPQANSSKKRKPDKDYA NYAEWMRQNPAYSLYQTILENPNALYPEYLSPEETKKIKQNWQRHLNGEDLGDSVSLALTLELWLQQVFNQKYRTGE
Sequences:
>Translated_477_residues MGRLYWTVYQNALVWTGELKSLLSLPNYQPKIDRAPMEDFLGLRYMIGDRSWFENVELLPAATVFTWDIPGKTLSRNRYW GWDELTPLTTPPPESEAVETLGHLFVDAVQSRVYPGERVGLTLSGGLDSRAILAAMPDHSHPVNTITHGRKDCEDYRIAA QVAAIAGDNSYFAEMNAENWLFSRVKTIWETDAYGSFIHFHFLSSLTQIKTQDLFNINLHGAWGDVTAMNIFDGLKFPDV VNKRLGLEKFALSLQHKNSVFERMNNYFKLCHSSPHIIWMDHRIRRFIFKDINVSLVQGIETRAPFIDCSLQDFLFTLSS TFSEDSNLYKPMLCQFFPKYYQTIPWQSTGEPISPPNFTRQVQKKLVQFQTKVTGKLNQFGLSFPQANSSKKRKPDKDYA NYAEWMRQNPAYSLYQTILENPNALYPEYLSPEETKKIKQNWQRHLNGEDLGDSVSLALTLELWLQQVFNQKYRTGE >Mature_476_residues GRLYWTVYQNALVWTGELKSLLSLPNYQPKIDRAPMEDFLGLRYMIGDRSWFENVELLPAATVFTWDIPGKTLSRNRYWG WDELTPLTTPPPESEAVETLGHLFVDAVQSRVYPGERVGLTLSGGLDSRAILAAMPDHSHPVNTITHGRKDCEDYRIAAQ VAAIAGDNSYFAEMNAENWLFSRVKTIWETDAYGSFIHFHFLSSLTQIKTQDLFNINLHGAWGDVTAMNIFDGLKFPDVV NKRLGLEKFALSLQHKNSVFERMNNYFKLCHSSPHIIWMDHRIRRFIFKDINVSLVQGIETRAPFIDCSLQDFLFTLSST FSEDSNLYKPMLCQFFPKYYQTIPWQSTGEPISPPNFTRQVQKKLVQFQTKVTGKLNQFGLSFPQANSSKKRKPDKDYAN YAEWMRQNPAYSLYQTILENPNALYPEYLSPEETKKIKQNWQRHLNGEDLGDSVSLALTLELWLQQVFNQKYRTGE
Specific function: Unknown
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.3.5.4
Molecular weight: Translated: 55137; Mature: 55006
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLYWTVYQNALVWTGELKSLLSLPNYQPKIDRAPMEDFLGLRYMIGDRSWFENVELLP CCCEEEEEECCCEEEHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEECCCHHHCCCEECE AATVFTWDIPGKTLSRNRYWGWDELTPLTTPPPESEAVETLGHLFVDAVQSRVYPGERVG EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE LTLSGGLDSRAILAAMPDHSHPVNTITHGRKDCEDYRIAAQVAAIAGDNSYFAEMNAENW EEEECCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHH LFSRVKTIWETDAYGSFIHFHFLSSLTQIKTQDLFNINLHGAWGDVTAMNIFDGLKFPDV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCCHHH VNKRLGLEKFALSLQHKNSVFERMNNYFKLCHSSPHIIWMDHRIRRFIFKDINVSLVQGI HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCHHHHHCH ETRAPFIDCSLQDFLFTLSSTFSEDSNLYKPMLCQFFPKYYQTIPWQSTGEPISPPNFTR HHCCCEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH QVQKKLVQFQTKVTGKLNQFGLSFPQANSSKKRKPDKDYANYAEWMRQNPAYSLYQTILE HHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHC NPNALYPEYLSPEETKKIKQNWQRHLNGEDLGDSVSLALTLELWLQQVFNQKYRTGE CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GRLYWTVYQNALVWTGELKSLLSLPNYQPKIDRAPMEDFLGLRYMIGDRSWFENVELLP CCEEEEEECCCEEEHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEECCCHHHCCCEECE AATVFTWDIPGKTLSRNRYWGWDELTPLTTPPPESEAVETLGHLFVDAVQSRVYPGERVG EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE LTLSGGLDSRAILAAMPDHSHPVNTITHGRKDCEDYRIAAQVAAIAGDNSYFAEMNAENW EEEECCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHH LFSRVKTIWETDAYGSFIHFHFLSSLTQIKTQDLFNINLHGAWGDVTAMNIFDGLKFPDV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCCHHH VNKRLGLEKFALSLQHKNSVFERMNNYFKLCHSSPHIIWMDHRIRRFIFKDINVSLVQGI HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCHHHHHCH ETRAPFIDCSLQDFLFTLSSTFSEDSNLYKPMLCQFFPKYYQTIPWQSTGEPISPPNFTR HHCCCEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH QVQKKLVQFQTKVTGKLNQFGLSFPQANSSKKRKPDKDYANYAEWMRQNPAYSLYQTILE HHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHC NPNALYPEYLSPEETKKIKQNWQRHLNGEDLGDSVSLALTLELWLQQVFNQKYRTGE CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-aspartate; L-glutamine
Specific reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA