Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113476043
Identifier: 113476043
GI number: 113476043
Start: 3723296
End: 3723547
Strand: Reverse
Name: 113476043
Synonym: Tery_2414
Alternate gene names: NA
Gene position: 3723547-3723296 (Counterclockwise)
Preceding gene: 113476044
Following gene: 113476042
Centisome position: 48.05
GC content: 30.95
Gene sequence:
>252_bases TTGCTTCAAAGACTAAATGTACTTTTGAATAGTAAAAAATTATTACTTACTAGTCAACCAACTAGTCAACCAAAGATAGT ATCATCATTATTACTTCTAGATATTCCTTTGCTTTTCCTGTCTACTCATCTGGGCAGCAAAATATCTTTAGCTATAGGTT CGGTTGACCCTGAATATTGCAAGTGGGCACAAATAATACTTAAGGCAGATAATTTTTCAAAATATTTTTTTCCTGATAAT ATAGTGTTGTGA
Upstream 100 bases:
>100_bases CTACAAAGTTTTGGTTATGGTGATGTAGTTGATAAATTTGAAAAGCGCTGTATTAATAGAAAAGGTATGAAAAAAACTTA AAAAATCTGAGCAAAATATT
Downstream 100 bases:
>100_bases GATTTTAGTCAAGAGGAGTTTGAGAAAGAAGAAAATCTAGACCAGGAATATGTCAAAGATTTAATTGCTCCGACCAAAGA TAAATATGAAAAGTTAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MLQRLNVLLNSKKLLLTSQPTSQPKIVSSLLLLDIPLLFLSTHLGSKISLAIGSVDPEYCKWAQIILKADNFSKYFFPDN IVL
Sequences:
>Translated_83_residues MLQRLNVLLNSKKLLLTSQPTSQPKIVSSLLLLDIPLLFLSTHLGSKISLAIGSVDPEYCKWAQIILKADNFSKYFFPDN IVL >Mature_83_residues MLQRLNVLLNSKKLLLTSQPTSQPKIVSSLLLLDIPLLFLSTHLGSKISLAIGSVDPEYCKWAQIILKADNFSKYFFPDN IVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9315; Mature: 9315
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQRLNVLLNSKKLLLTSQPTSQPKIVSSLLLLDIPLLFLSTHLGSKISLAIGSVDPEYC CCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH KWAQIILKADNFSKYFFPDNIVL HHHHHHEECCCCCEEECCCCCCC >Mature Secondary Structure MLQRLNVLLNSKKLLLTSQPTSQPKIVSSLLLLDIPLLFLSTHLGSKISLAIGSVDPEYC CCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH KWAQIILKADNFSKYFFPDNIVL HHHHHHEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA