Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is wecB [C]
Identifier: 113476031
GI number: 113476031
Start: 3707845
End: 3708957
Strand: Reverse
Name: wecB [C]
Synonym: Tery_2401
Alternate gene names: 113476031
Gene position: 3708957-3707845 (Counterclockwise)
Preceding gene: 113476034
Following gene: 113476030
Centisome position: 47.86
GC content: 35.31
Gene sequence:
>1113_bases ATGCTAAAAATTCCGATCCAAATAGCAATTATCTTAGGAACTCGCCCCGAAGCCATCAAACTAGCACCAGTTATTCAACT TTTTCAAAACTCTCCTGATTTTAAAACCCTGGTAATTTTAACTGGTCAACATAAAGAAATGGTTGCCCAAGTAATGAAAT TATTTGATATTAATCCTAACCAGGATTTAGCCATTATGCAAACTAGACAAACATTGACGGATATTATGTGCCGAAGTTTG CAAGGACTAGAAGAATTATTCCTACAGTTAAAGCCCAAATTAGTATTAGTTCAAGGAGATACTAGTACCACTTTTGCTGC TGCCCTAGCTGCATTTTATCAAAAAATTCCTGTCGGTCATCTGGAGGCAGGTTTACGAACTAATAATTTATTTAATCCCT ATCCCGAAGAGGTAAACCGCCGTTTAATTTCTCAGATAGCTCAATTGCATTTTGCTCCTACAACTTTAGCTGTGGAAAAT TTACAAAAATCTGGAGTATTAGGAAAAGTTTATCAAACAGGAAATACGGTAATTGATGCCTTACTTAAGGTAGCAAAATC TCAAGCTATATGTCATATTGATGGTTTAGATTGGTTAAAATATAGGGTAATATTAGCAACAGTTCATCGGCGAGAAAATT GGGGGGAACCTTTAAAAGAAATTGCTCAAGCATTTCTGCAAATTTTAGATAAATTTCCTGATACTGCTTTGGTTTTACCT CTGCATAAAAATCCCACAGTTAGGGAACCTTTAAAAGCAATTTTAGGGAGTCATCCAAGAATATTTTTAGAGGAACCTTT TGATTATAGTGAGTTGGTAGGGGCAATTAAAAATTGTTATTTAATCCTAACTGATTCTGGGGGTTTACAGGAAGAAGCTC CAAGTTTAGGTAAACCTGTTTTAGTATTACGAGAAACAACGGAAAGACCAGAAGCAATAATAGCTGGAACAGCTAAAATT GTTGGGACTAGTTCTAGTAATATTGTGGCTGTTGCTGAAGAATTATTGAGTGATAATGCTAAATATAAAAAGATGGCAAT GGCAATTAATCCTTTCGGTGATGGTCATGCCTCCGAGAGAATTATCAAGATTGTGCGAGATTATTTTAACTAG
Upstream 100 bases:
>100_bases GTAATAAGTACCTCTATATTCTCTAGTTATAGAATATCTACTTGACTAAAATACTATATAATTATAATTATTGCCTCAAA ACATATAAAGTTAAATTTAA
Downstream 100 bases:
>100_bases AATAGATATCTCCAAAAATAAAAAAGAAAATGAATTATTCTATAGAAATAATTGATCATTTATTCCTATTGTCTCCAAAT CTATTCCCTATTTGCTGGAA
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MLKIPIQIAIILGTRPEAIKLAPVIQLFQNSPDFKTLVILTGQHKEMVAQVMKLFDINPNQDLAIMQTRQTLTDIMCRSL QGLEELFLQLKPKLVLVQGDTSTTFAAALAAFYQKIPVGHLEAGLRTNNLFNPYPEEVNRRLISQIAQLHFAPTTLAVEN LQKSGVLGKVYQTGNTVIDALLKVAKSQAICHIDGLDWLKYRVILATVHRRENWGEPLKEIAQAFLQILDKFPDTALVLP LHKNPTVREPLKAILGSHPRIFLEEPFDYSELVGAIKNCYLILTDSGGLQEEAPSLGKPVLVLRETTERPEAIIAGTAKI VGTSSSNIVAVAEELLSDNAKYKKMAMAINPFGDGHASERIIKIVRDYFN
Sequences:
>Translated_370_residues MLKIPIQIAIILGTRPEAIKLAPVIQLFQNSPDFKTLVILTGQHKEMVAQVMKLFDINPNQDLAIMQTRQTLTDIMCRSL QGLEELFLQLKPKLVLVQGDTSTTFAAALAAFYQKIPVGHLEAGLRTNNLFNPYPEEVNRRLISQIAQLHFAPTTLAVEN LQKSGVLGKVYQTGNTVIDALLKVAKSQAICHIDGLDWLKYRVILATVHRRENWGEPLKEIAQAFLQILDKFPDTALVLP LHKNPTVREPLKAILGSHPRIFLEEPFDYSELVGAIKNCYLILTDSGGLQEEAPSLGKPVLVLRETTERPEAIIAGTAKI VGTSSSNIVAVAEELLSDNAKYKKMAMAINPFGDGHASERIIKIVRDYFN >Mature_370_residues MLKIPIQIAIILGTRPEAIKLAPVIQLFQNSPDFKTLVILTGQHKEMVAQVMKLFDINPNQDLAIMQTRQTLTDIMCRSL QGLEELFLQLKPKLVLVQGDTSTTFAAALAAFYQKIPVGHLEAGLRTNNLFNPYPEEVNRRLISQIAQLHFAPTTLAVEN LQKSGVLGKVYQTGNTVIDALLKVAKSQAICHIDGLDWLKYRVILATVHRRENWGEPLKEIAQAFLQILDKFPDTALVLP LHKNPTVREPLKAILGSHPRIFLEEPFDYSELVGAIKNCYLILTDSGGLQEEAPSLGKPVLVLRETTERPEAIIAGTAKI VGTSSSNIVAVAEELLSDNAKYKKMAMAINPFGDGHASERIIKIVRDYFN
Specific function: Catalyzes The Reversible Epimerization At C-2 Of UDP-N- Acetylglucosamine (UDP-Glcnac) And Thereby Provides Bacteria With UDP-N-Acetylmannosamine (UDP-Mannac), The Activated Donor Of Mannac Residues. Also Involved In Bacteriophage N4 Adsorption. [C]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=372, Percent_Identity=47.5806451612903, Blast_Score=332, Evalue=2e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 41074; Mature: 41074
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIPIQIAIILGTRPEAIKLAPVIQLFQNSPDFKTLVILTGQHKEMVAQVMKLFDINPN CEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCC QDLAIMQTRQTLTDIMCRSLQGLEELFLQLKPKLVLVQGDTSTTFAAALAAFYQKIPVGH CCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCHH LEAGLRTNNLFNPYPEEVNRRLISQIAQLHFAPTTLAVENLQKSGVLGKVYQTGNTVIDA HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHCCHHHHHH LLKVAKSQAICHIDGLDWLKYRVILATVHRRENWGEPLKEIAQAFLQILDKFPDTALVLP HHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEE LHKNPTVREPLKAILGSHPRIFLEEPFDYSELVGAIKNCYLILTDSGGLQEEAPSLGKPV ECCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCE LVLRETTERPEAIIAGTAKIVGTSSSNIVAVAEELLSDNAKYKKMAMAINPFGDGHASER EEEECCCCCCCEEEECCEEEEECCCCCHHHHHHHHHCCCCHHHHHEEEECCCCCCHHHHH IIKIVRDYFN HHHHHHHHCC >Mature Secondary Structure MLKIPIQIAIILGTRPEAIKLAPVIQLFQNSPDFKTLVILTGQHKEMVAQVMKLFDINPN CEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCC QDLAIMQTRQTLTDIMCRSLQGLEELFLQLKPKLVLVQGDTSTTFAAALAAFYQKIPVGH CCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCHH LEAGLRTNNLFNPYPEEVNRRLISQIAQLHFAPTTLAVENLQKSGVLGKVYQTGNTVIDA HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHCCHHHHHH LLKVAKSQAICHIDGLDWLKYRVILATVHRRENWGEPLKEIAQAFLQILDKFPDTALVLP HHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEE LHKNPTVREPLKAILGSHPRIFLEEPFDYSELVGAIKNCYLILTDSGGLQEEAPSLGKPV ECCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCE LVLRETTERPEAIIAGTAKIVGTSSSNIVAVAEELLSDNAKYKKMAMAINPFGDGHASER EEEECCCCCCCEEEECCEEEEECCCCCHHHHHHHHHCCCCHHHHHEEEECCCCCCHHHHH IIKIVRDYFN HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]