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The map label for this gene is yfgC [C]

Identifier: 113476030

GI number: 113476030

Start: 3705454

End: 3707106

Strand: Reverse

Name: yfgC [C]

Synonym: Tery_2400

Alternate gene names: 113476030

Gene position: 3707106-3705454 (Counterclockwise)

Preceding gene: 113476031

Following gene: 113476027

Centisome position: 47.83

GC content: 32.73

Gene sequence:

>1653_bases
ATGAAACCCTTACTAAATTATATCACAATTATACTCAGCATATTTGCCCAGCAAAACTTAGCCTTAGCAGAGATCAATTT
TCTAGAAAATAAACCCAGAAATTCCCAGTCATATTACCTCCAGTTAAATACTGATAATAAAAAATTAGCTTCCCTAAATT
GGGTGAATAAACAAAACCCAATACATATAGATTATTACCGGCTTGATTCACATTTAGTAACCGAAAGTATAATCCCTAAT
CTAGAAAAAAAACCGAAAAATTCTCAGTCAAAAAAAATTTTTTCTACTAACTCTAAGCCTCAAACACAAGAGGAAAAATT
AGCAGCAGCAGACAGACTTTATTTAGCAGGAGAAAAAGCAGCAGCAGAAAAACTTTATCGAGAAGTAAAAGAACCATTTA
CTGGAGATATTGAACTCCAACTTGATCGTCCTCAAGCAGTATATGAACCTACAGAATTACCCATAACTGCTCAAGTATAT
TGGCGACAAGCACAGGAAGGTTTAGTCAAAAATATTGAAACTCAGACATTTATATCTTTACAATTATTAGTTAAAGAGTA
TCCTGAATTTATTCCTGCCCATATTCAACTAGCAGAAAATTTAAAAGCTGATGAACAAACAGAATTAGCCTTAGAAGTCT
TACATCAAGCAACAGGTTTATATCCCAATGAACCAGAATTAATTAAAGCAACAATTACTGCTCTAGCAGATGATAAAAAA
TGGTTAGAAGCAAGTTTATCTGCTCAACAATTTGCTTTAATGAACACCCAAAATTCCCAATTTGATGAATTTAATCAATT
AGCAGAAACCTATAGAAAAAAATTTCAATCTCAGCTTAAATCAAGATTAAGAAGAAATACAATTGCTAATGTTGTGACTG
GAGCATTAGGTGTAGCTATTACTGGTAATCCATTTGCGGCTATAAATGCAGTTCAAACAACAGCAATGATGCTCCAAGGA
GAATCAAGAATTGGCAAAACCATAGCAAATTATGCTCAAAAAAATTTACCTATAGTTGAGGATGAAGAAATTATCAAATA
TGTCAATAACATGGGCAAAAAACTTGCAGATATGACAGGTAGAAATGAATTTGAATATAATTTTTATATAGTCAATGATG
AAAACCTCAATGCTTTTGCTTTACCAGGGGGGCAAATATTTCTGAATTTAGGAGCAATATTTAAAACTAAATCAGAAGCA
GAATTAGCAGGTTTACTTGCTCATGAACTAGCTCATACTGTATTATCCCATGGATTTAAGTTAATGTCTGAAGGTAATTT
AATTAATAGCGTGGTGCAATATGTTCCTTATGCTGGGGCTACAGTTAGTAATTTAATTGTGCTTAACTATAGTCGAAAAA
TGGAACGTCAAGCAGATGTATTAGGAACCAGAATTTTAGTATCAGCAGGTTATGCTGCAGATGGGGTAAGAAATCTGATG
GTTACTCTTAATGAAGGGAAAGAAGATATGGGTGTTCTTGCTTGGTTATCTACTCACCCAGAGACAGCAGAAAGAGTCCG
TTATTTAGAAGAATTAATTGTTAATAATGGTTATAATCGTTATGCTTATGAAGGAGTAGTATCTCATGCTAAAATGCGGA
CAAAAGCTAAAGCTTTATTGGTAGAAAAGAAAAAAGATTTTTCAAAAATTTAG

Upstream 100 bases:

>100_bases
TATAAAGTATAGAAAAAGCAATTATCCAACTAGTTTTTTAATAGTTAATAATATTTTTAACAAAAAAAATGTTTTGAAAA
TTTAAAAAATATGTAAAATT

Downstream 100 bases:

>100_bases
ATGGTAAGCATTTAGTTATTAGTAGTTAGTTATTAGTAGTTAGTTCTCAGCAGTTAGTTCTCAGCATTTTTTAGCTAACT
GCTAGAATGCTATATTAATT

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MKPLLNYITIILSIFAQQNLALAEINFLENKPRNSQSYYLQLNTDNKKLASLNWVNKQNPIHIDYYRLDSHLVTESIIPN
LEKKPKNSQSKKIFSTNSKPQTQEEKLAAADRLYLAGEKAAAEKLYREVKEPFTGDIELQLDRPQAVYEPTELPITAQVY
WRQAQEGLVKNIETQTFISLQLLVKEYPEFIPAHIQLAENLKADEQTELALEVLHQATGLYPNEPELIKATITALADDKK
WLEASLSAQQFALMNTQNSQFDEFNQLAETYRKKFQSQLKSRLRRNTIANVVTGALGVAITGNPFAAINAVQTTAMMLQG
ESRIGKTIANYAQKNLPIVEDEEIIKYVNNMGKKLADMTGRNEFEYNFYIVNDENLNAFALPGGQIFLNLGAIFKTKSEA
ELAGLLAHELAHTVLSHGFKLMSEGNLINSVVQYVPYAGATVSNLIVLNYSRKMERQADVLGTRILVSAGYAADGVRNLM
VTLNEGKEDMGVLAWLSTHPETAERVRYLEELIVNNGYNRYAYEGVVSHAKMRTKAKALLVEKKKDFSKI

Sequences:

>Translated_550_residues
MKPLLNYITIILSIFAQQNLALAEINFLENKPRNSQSYYLQLNTDNKKLASLNWVNKQNPIHIDYYRLDSHLVTESIIPN
LEKKPKNSQSKKIFSTNSKPQTQEEKLAAADRLYLAGEKAAAEKLYREVKEPFTGDIELQLDRPQAVYEPTELPITAQVY
WRQAQEGLVKNIETQTFISLQLLVKEYPEFIPAHIQLAENLKADEQTELALEVLHQATGLYPNEPELIKATITALADDKK
WLEASLSAQQFALMNTQNSQFDEFNQLAETYRKKFQSQLKSRLRRNTIANVVTGALGVAITGNPFAAINAVQTTAMMLQG
ESRIGKTIANYAQKNLPIVEDEEIIKYVNNMGKKLADMTGRNEFEYNFYIVNDENLNAFALPGGQIFLNLGAIFKTKSEA
ELAGLLAHELAHTVLSHGFKLMSEGNLINSVVQYVPYAGATVSNLIVLNYSRKMERQADVLGTRILVSAGYAADGVRNLM
VTLNEGKEDMGVLAWLSTHPETAERVRYLEELIVNNGYNRYAYEGVVSHAKMRTKAKALLVEKKKDFSKI
>Mature_550_residues
MKPLLNYITIILSIFAQQNLALAEINFLENKPRNSQSYYLQLNTDNKKLASLNWVNKQNPIHIDYYRLDSHLVTESIIPN
LEKKPKNSQSKKIFSTNSKPQTQEEKLAAADRLYLAGEKAAAEKLYREVKEPFTGDIELQLDRPQAVYEPTELPITAQVY
WRQAQEGLVKNIETQTFISLQLLVKEYPEFIPAHIQLAENLKADEQTELALEVLHQATGLYPNEPELIKATITALADDKK
WLEASLSAQQFALMNTQNSQFDEFNQLAETYRKKFQSQLKSRLRRNTIANVVTGALGVAITGNPFAAINAVQTTAMMLQG
ESRIGKTIANYAQKNLPIVEDEEIIKYVNNMGKKLADMTGRNEFEYNFYIVNDENLNAFALPGGQIFLNLGAIFKTKSEA
ELAGLLAHELAHTVLSHGFKLMSEGNLINSVVQYVPYAGATVSNLIVLNYSRKMERQADVLGTRILVSAGYAADGVRNLM
VTLNEGKEDMGVLAWLSTHPETAERVRYLEELIVNNGYNRYAYEGVVSHAKMRTKAKALLVEKKKDFSKI

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=217, Percent_Identity=22.1198156682028, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 61988; Mature: 61988

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLLNYITIILSIFAQQNLALAEINFLENKPRNSQSYYLQLNTDNKKLASLNWVNKQNP
CCHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCC
IHIDYYRLDSHLVTESIIPNLEKKPKNSQSKKIFSTNSKPQTQEEKLAAADRLYLAGEKA
EEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHEECCCHH
AAEKLYREVKEPFTGDIELQLDRPQAVYEPTELPITAQVYWRQAQEGLVKNIETQTFISL
HHHHHHHHHHCCCCCCEEEEECCCCHHCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHH
QLLVKEYPEFIPAHIQLAENLKADEQTELALEVLHQATGLYPNEPELIKATITALADDKK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH
WLEASLSAQQFALMNTQNSQFDEFNQLAETYRKKFQSQLKSRLRRNTIANVVTGALGVAI
HHHHHCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
TGNPFAAINAVQTTAMMLQGESRIGKTIANYAQKNLPIVEDEEIIKYVNNMGKKLADMTG
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
RNEFEYNFYIVNDENLNAFALPGGQIFLNLGAIFKTKSEAELAGLLAHELAHTVLSHGFK
CCCEEEEEEEEECCCCCEEECCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHCCHH
LMSEGNLINSVVQYVPYAGATVSNLIVLNYSRKMERQADVLGTRILVSAGYAADGVRNLM
HHCCCCHHHHHHHHCCCCCCCHHCEEEEECHHHHHHHHHHHHHHHEEECCCCHHCHHEEE
VTLNEGKEDMGVLAWLSTHPETAERVRYLEELIVNNGYNRYAYEGVVSHAKMRTKAKALL
EEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VEKKKDFSKI
HHHHHHHCCC
>Mature Secondary Structure
MKPLLNYITIILSIFAQQNLALAEINFLENKPRNSQSYYLQLNTDNKKLASLNWVNKQNP
CCHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCC
IHIDYYRLDSHLVTESIIPNLEKKPKNSQSKKIFSTNSKPQTQEEKLAAADRLYLAGEKA
EEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHEECCCHH
AAEKLYREVKEPFTGDIELQLDRPQAVYEPTELPITAQVYWRQAQEGLVKNIETQTFISL
HHHHHHHHHHCCCCCCEEEEECCCCHHCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHH
QLLVKEYPEFIPAHIQLAENLKADEQTELALEVLHQATGLYPNEPELIKATITALADDKK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH
WLEASLSAQQFALMNTQNSQFDEFNQLAETYRKKFQSQLKSRLRRNTIANVVTGALGVAI
HHHHHCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
TGNPFAAINAVQTTAMMLQGESRIGKTIANYAQKNLPIVEDEEIIKYVNNMGKKLADMTG
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
RNEFEYNFYIVNDENLNAFALPGGQIFLNLGAIFKTKSEAELAGLLAHELAHTVLSHGFK
CCCEEEEEEEEECCCCCEEECCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHCCHH
LMSEGNLINSVVQYVPYAGATVSNLIVLNYSRKMERQADVLGTRILVSAGYAADGVRNLM
HHCCCCHHHHHHHHCCCCCCCHHCEEEEECHHHHHHHHHHHHHHHEEECCCCHHCHHEEE
VTLNEGKEDMGVLAWLSTHPETAERVRYLEELIVNNGYNRYAYEGVVSHAKMRTKAKALL
EEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VEKKKDFSKI
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]