Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476027

Identifier: 113476027

GI number: 113476027

Start: 3702494

End: 3702724

Strand: Reverse

Name: 113476027

Synonym: Tery_2397

Alternate gene names: NA

Gene position: 3702724-3702494 (Counterclockwise)

Preceding gene: 113476030

Following gene: 113476026

Centisome position: 47.78

GC content: 38.1

Gene sequence:

>231_bases
ATGCTAGCATCCTTAAGTCATGATTTGCAACAAAAAACGATCAAGGCTTTTAATAATGGCCAAAGCCAGAGCGAAGTTAG
CTGGAATTTTGGCATCAGTAGAAATATTTTAGGTGGATGGCTCAAGGGCAGAAAAGAAATAGGAGGCTGTAAAGCTTTGA
CAGAATTTCAGAAAGGATGTAAGCTGAAAATCAAAGACTTAGAAAAATTCCGAGAGTTTCAGCAAGCATGA

Upstream 100 bases:

>100_bases
TATGAGACTATTTACGATTAATATAGCATTACGAGGCAAGATATGAGAAGGTTAAGGTAGAATAGAAGAGAAAATAATAG
AGTAGATAACCAGATACCCG

Downstream 100 bases:

>100_bases
TAGTCACTGGGGAGAGGAACTCAGGCAGTAGAATGTGAGCGATCCCCTGAAAAAAAAATGGGAATTACTCCTAAAAAAAC
TTATGGTTATCAACACAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MLASLSHDLQQKTIKAFNNGQSQSEVSWNFGISRNILGGWLKGRKEIGGCKALTEFQKGCKLKIKDLEKFREFQQA

Sequences:

>Translated_76_residues
MLASLSHDLQQKTIKAFNNGQSQSEVSWNFGISRNILGGWLKGRKEIGGCKALTEFQKGCKLKIKDLEKFREFQQA
>Mature_76_residues
MLASLSHDLQQKTIKAFNNGQSQSEVSWNFGISRNILGGWLKGRKEIGGCKALTEFQKGCKLKIKDLEKFREFQQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8616; Mature: 8616

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLASLSHDLQQKTIKAFNNGQSQSEVSWNFGISRNILGGWLKGRKEIGGCKALTEFQKGC
CCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC
KLKIKDLEKFREFQQA
CEEHHHHHHHHHHHCC
>Mature Secondary Structure
MLASLSHDLQQKTIKAFNNGQSQSEVSWNFGISRNILGGWLKGRKEIGGCKALTEFQKGC
CCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC
KLKIKDLEKFREFQQA
CEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA