| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475910
Identifier: 113475910
GI number: 113475910
Start: 3535928
End: 3536137
Strand: Reverse
Name: 113475910
Synonym: Tery_2270
Alternate gene names: NA
Gene position: 3536137-3535928 (Counterclockwise)
Preceding gene: 113475911
Following gene: 113475909
Centisome position: 45.63
GC content: 30.48
Gene sequence:
>210_bases TTGGATATAGGAATAGGTACTGCTTTAATAGTAGAAAATTTACTGCAAATTGAACCTGACTATAGAATAACTGGAATTGA TACTAGTGAATCTTTATTAGAAGAAGCTCAAAAAAGACTAGGAAAAAAAGTTGATTTATATTTTCAAAATGTTTCTGAGT TAGATATTGGTAAAAAATTCGATGTGGCTTATTCTCGTGGTGCTGCGTAG
Upstream 100 bases:
>100_bases GGAGTTGCTAAATTTTATAGTGATGCTGTTCAAAAAAAATAGAAATTATTATGAAATTGCTACTGACCTTGCTCAAATAA TGGGATAAGCTAGAGATTTA
Downstream 100 bases:
>100_bases ACGTTTTTTTTTAAATAGCAATCCCAAATCAGAAACAATGTTGGCTAGCCACATTTTTAGTTTTTGATATATACAGAAAA GCTTGGATTTTGTTTCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MDIGIGTALIVENLLQIEPDYRITGIDTSESLLEEAQKRLGKKVDLYFQNVSELDIGKKFDVAYSRGAA
Sequences:
>Translated_69_residues MDIGIGTALIVENLLQIEPDYRITGIDTSESLLEEAQKRLGKKVDLYFQNVSELDIGKKFDVAYSRGAA >Mature_69_residues MDIGIGTALIVENLLQIEPDYRITGIDTSESLLEEAQKRLGKKVDLYFQNVSELDIGKKFDVAYSRGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7661; Mature: 7661
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIGIGTALIVENLLQIEPDYRITGIDTSESLLEEAQKRLGKKVDLYFQNVSELDIGKKF CCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCEEHHHHCCCCCCCCCCCC DVAYSRGAA CCCCCCCCC >Mature Secondary Structure MDIGIGTALIVENLLQIEPDYRITGIDTSESLLEEAQKRLGKKVDLYFQNVSELDIGKKF CCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCEEHHHHCCCCCCCCCCCC DVAYSRGAA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA